Gene : Phvul.003G168500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR19271:SF5 - CYTOCHROME B Genomic Order:  1709
Name:  ? Phvul.003G168500 Secondary Identifier:  ? PAC:37145488
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G168500 0.5kb upstream 0.5kb upstream 841 true Chr03: 38982417-38983257 Phaseolus vulgaris
Phvul.003G168500 0.5kb upstream 0.5kb upstream 500 false Chr03: 38982758-38983257 Phaseolus vulgaris
Phvul.003G168500 0.5kb downstream 0.5kb downstream 841 true Chr03: 38981917-38982757 Phaseolus vulgaris
Phvul.003G168500 0.5kb downstream 0.5kb downstream 500 false Chr03: 38981917-38982416 Phaseolus vulgaris
Phvul.003G168500 1.0kb upstream 1.0kb upstream 1341 true Chr03: 38982417-38983757 Phaseolus vulgaris
Phvul.003G168500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38982758-38983757 Phaseolus vulgaris
Phvul.003G168500 1.0kb downstream 1.0kb downstream 1341 true Chr03: 38981417-38982757 Phaseolus vulgaris
Phvul.003G168500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38981417-38982416 Phaseolus vulgaris
Phvul.003G168500 2.0kb upstream 2.0kb upstream 2341 true Chr03: 38982417-38984757 Phaseolus vulgaris
Phvul.003G168500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38982758-38984757 Phaseolus vulgaris
Phvul.003G168500 2.0kb downstream 2.0kb downstream 2341 true Chr03: 38980417-38982757 Phaseolus vulgaris
Phvul.003G168500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38980417-38982416 Phaseolus vulgaris
Phvul.003G168500 5.0kb upstream 5.0kb upstream 5341 true Chr03: 38982417-38987757 Phaseolus vulgaris
Phvul.003G168500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38982758-38987757 Phaseolus vulgaris
Phvul.003G168500 5.0kb downstream 5.0kb downstream 5341 true Chr03: 38977417-38982757 Phaseolus vulgaris
Phvul.003G168500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38977417-38982416 Phaseolus vulgaris
Phvul.003G168500 10.0kb upstream 10.0kb upstream 10341 true Chr03: 38982417-38992757 Phaseolus vulgaris
Phvul.003G168500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38982758-38992757 Phaseolus vulgaris
Phvul.003G168500 10.0kb downstream 10.0kb downstream 10341 true Chr03: 38972417-38982757 Phaseolus vulgaris
Phvul.003G168500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38972417-38982416 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121616109 5273 Angiosperm Singleton cluster - no MSA
122251472 5265 Fabidae Singleton cluster - no MSA
123994417 5270 Rosid Singleton cluster - no MSA
123569089 5271 Pentapetalae Singleton cluster - no MSA
122603830 5272 Eudicot Singleton cluster - no MSA
121350166 5274 Embryophyte View MSA
123381601 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79573 0.0 18.6012    
cufflinks 5.92423 0.0 22.8634    
cufflinks 6.40332 0.0 24.42    
cufflinks 21.2341 0.0 72.0212   High
cufflinks 25.4705 0.0 86.2867   High
cufflinks 15.1196 0.0 53.7987    
cufflinks 3.06994 0.0 12.4651   Low
cufflinks 12.9457 0.0 46.5252    
cufflinks 4.99458 0.0 19.6048    
cufflinks 22.6044 0.0 77.2415   High
cufflinks 4.0307 0.0 16.0593   Low

0 Strain