Gene : Phvul.003G169100 P. vulgaris v2.1
Defline:  (1 of 17) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1714
Name:  ? Phvul.003G169100 Secondary Identifier:  ? PAC:37146233
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G169100 0.5kb upstream 0.5kb upstream 2752 true Chr03: 39045812-39048563 Phaseolus vulgaris
Phvul.003G169100 0.5kb upstream 0.5kb upstream 500 false Chr03: 39048064-39048563 Phaseolus vulgaris
Phvul.003G169100 0.5kb downstream 0.5kb downstream 2752 true Chr03: 39045312-39048063 Phaseolus vulgaris
Phvul.003G169100 0.5kb downstream 0.5kb downstream 500 false Chr03: 39045312-39045811 Phaseolus vulgaris
Phvul.003G169100 1.0kb upstream 1.0kb upstream 3252 true Chr03: 39045812-39049063 Phaseolus vulgaris
Phvul.003G169100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39048064-39049063 Phaseolus vulgaris
Phvul.003G169100 1.0kb downstream 1.0kb downstream 3252 true Chr03: 39044812-39048063 Phaseolus vulgaris
Phvul.003G169100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39044812-39045811 Phaseolus vulgaris
Phvul.003G169100 2.0kb upstream 2.0kb upstream 4252 true Chr03: 39045812-39050063 Phaseolus vulgaris
Phvul.003G169100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39048064-39050063 Phaseolus vulgaris
Phvul.003G169100 2.0kb downstream 2.0kb downstream 4252 true Chr03: 39043812-39048063 Phaseolus vulgaris
Phvul.003G169100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39043812-39045811 Phaseolus vulgaris
Phvul.003G169100 5.0kb upstream 5.0kb upstream 7252 true Chr03: 39045812-39053063 Phaseolus vulgaris
Phvul.003G169100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39048064-39053063 Phaseolus vulgaris
Phvul.003G169100 5.0kb downstream 5.0kb downstream 7252 true Chr03: 39040812-39048063 Phaseolus vulgaris
Phvul.003G169100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39040812-39045811 Phaseolus vulgaris
Phvul.003G169100 10.0kb upstream 10.0kb upstream 12252 true Chr03: 39045812-39058063 Phaseolus vulgaris
Phvul.003G169100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39048064-39058063 Phaseolus vulgaris
Phvul.003G169100 10.0kb downstream 10.0kb downstream 12252 true Chr03: 39035812-39048063 Phaseolus vulgaris
Phvul.003G169100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39035812-39045811 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.079 0.0 135.119 High  
cufflinks 313.372 0.0 966.34 High  
cufflinks 309.723 0.0 962.589 High  
cufflinks 785.046 0.0 2987.71 High High
cufflinks 177.604 0.0 513.619 High  
cufflinks 378.583 0.0 1209.22 High  
cufflinks 53.8493 0.0 139.922 High  
cufflinks 85.8721 0.0 228.252 High  
cufflinks 6.12453 0.0 17.9803   Low
cufflinks 21.8895 0.0 57.5716   Low
cufflinks 341.171 0.0 1075.34 High  

0 Strain