Gene : Phvul.003G154300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31807:SF2 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Genomic Order:  1566
Name:  ? Phvul.003G154300 Secondary Identifier:  ? PAC:37146085
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G154300 0.5kb upstream 0.5kb upstream 6060 true Chr03: 36997056-37003115 Phaseolus vulgaris
Phvul.003G154300 0.5kb upstream 0.5kb upstream 500 false Chr03: 36997056-36997555 Phaseolus vulgaris
Phvul.003G154300 0.5kb downstream 0.5kb downstream 6060 true Chr03: 36997556-37003615 Phaseolus vulgaris
Phvul.003G154300 0.5kb downstream 0.5kb downstream 500 false Chr03: 37003116-37003615 Phaseolus vulgaris
Phvul.003G154300 1.0kb upstream 1.0kb upstream 6560 true Chr03: 36996556-37003115 Phaseolus vulgaris
Phvul.003G154300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36996556-36997555 Phaseolus vulgaris
Phvul.003G154300 1.0kb downstream 1.0kb downstream 6560 true Chr03: 36997556-37004115 Phaseolus vulgaris
Phvul.003G154300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37003116-37004115 Phaseolus vulgaris
Phvul.003G154300 2.0kb upstream 2.0kb upstream 7560 true Chr03: 36995556-37003115 Phaseolus vulgaris
Phvul.003G154300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36995556-36997555 Phaseolus vulgaris
Phvul.003G154300 2.0kb downstream 2.0kb downstream 7560 true Chr03: 36997556-37005115 Phaseolus vulgaris
Phvul.003G154300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37003116-37005115 Phaseolus vulgaris
Phvul.003G154300 5.0kb upstream 5.0kb upstream 10560 true Chr03: 36992556-37003115 Phaseolus vulgaris
Phvul.003G154300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36992556-36997555 Phaseolus vulgaris
Phvul.003G154300 5.0kb downstream 5.0kb downstream 10560 true Chr03: 36997556-37008115 Phaseolus vulgaris
Phvul.003G154300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37003116-37008115 Phaseolus vulgaris
Phvul.003G154300 10.0kb upstream 10.0kb upstream 15560 true Chr03: 36987556-37003115 Phaseolus vulgaris
Phvul.003G154300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36987556-36997555 Phaseolus vulgaris
Phvul.003G154300 10.0kb downstream 10.0kb downstream 15560 true Chr03: 36997556-37013115 Phaseolus vulgaris
Phvul.003G154300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37003116-37013115 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309736 5265 Fabidae View MSA
124066469 5270 Rosid View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.338373 0.0 1.2152 Low Low
cufflinks 1.93809 0.0 5.73706    
cufflinks 9.7553 0.0 25.3089    
cufflinks 1.16069 0.0 3.65859    
cufflinks 1.65258 0.0 5.01042    
cufflinks 9.13677 0.0 23.764    
cufflinks 6.80243 0.0 17.9403    
cufflinks 21.9507 0.0 57.5167   High
cufflinks 2.93733 0.0 8.3174    
cufflinks 3.62712 0.0 10.0853    
cufflinks 3.82648 0.0 10.6182    

0 Strain