Gene : Phvul.003G155500 P. vulgaris v2.1
Defline:  (1 of 2) K13431 - signal recognition particle receptor subunit alpha (SRPR) Genomic Order:  1579
Name:  ? Phvul.003G155500 Secondary Identifier:  ? PAC:37148117
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G155500 0.5kb upstream 0.5kb upstream 4450 true Chr03: 37109672-37114121 Phaseolus vulgaris
Phvul.003G155500 0.5kb upstream 0.5kb upstream 500 false Chr03: 37109672-37110171 Phaseolus vulgaris
Phvul.003G155500 0.5kb downstream 0.5kb downstream 4450 true Chr03: 37110172-37114621 Phaseolus vulgaris
Phvul.003G155500 0.5kb downstream 0.5kb downstream 500 false Chr03: 37114122-37114621 Phaseolus vulgaris
Phvul.003G155500 1.0kb upstream 1.0kb upstream 4950 true Chr03: 37109172-37114121 Phaseolus vulgaris
Phvul.003G155500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37109172-37110171 Phaseolus vulgaris
Phvul.003G155500 1.0kb downstream 1.0kb downstream 4950 true Chr03: 37110172-37115121 Phaseolus vulgaris
Phvul.003G155500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37114122-37115121 Phaseolus vulgaris
Phvul.003G155500 2.0kb upstream 2.0kb upstream 5950 true Chr03: 37108172-37114121 Phaseolus vulgaris
Phvul.003G155500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37108172-37110171 Phaseolus vulgaris
Phvul.003G155500 2.0kb downstream 2.0kb downstream 5950 true Chr03: 37110172-37116121 Phaseolus vulgaris
Phvul.003G155500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37114122-37116121 Phaseolus vulgaris
Phvul.003G155500 5.0kb upstream 5.0kb upstream 8950 true Chr03: 37105172-37114121 Phaseolus vulgaris
Phvul.003G155500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37105172-37110171 Phaseolus vulgaris
Phvul.003G155500 5.0kb downstream 5.0kb downstream 8950 true Chr03: 37110172-37119121 Phaseolus vulgaris
Phvul.003G155500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37114122-37119121 Phaseolus vulgaris
Phvul.003G155500 10.0kb upstream 10.0kb upstream 13950 true Chr03: 37100172-37114121 Phaseolus vulgaris
Phvul.003G155500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37100172-37110171 Phaseolus vulgaris
Phvul.003G155500 10.0kb downstream 10.0kb downstream 13950 true Chr03: 37110172-37124121 Phaseolus vulgaris
Phvul.003G155500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37114122-37124121 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311012 5265 Fabidae View MSA
124061133 5270 Rosid View MSA
123748391 5271 Pentapetalae View MSA
122789994 5272 Eudicot View MSA
122043067 5273 Angiosperm View MSA
121346015 5274 Embryophyte View MSA
123425096 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.0877 0.0 60.2439   Low
cufflinks 30.5104 0.0 80.8038    
cufflinks 30.5053 0.0 80.6838    
cufflinks 27.1446 0.0 71.1826    
cufflinks 29.6335 0.0 78.0183    
cufflinks 31.6031 0.0 83.9363    
cufflinks 38.0524 0.0 102.946 High  
cufflinks 39.2364 0.0 106.373 High  
cufflinks 43.7673 0.0 119.772 High High
cufflinks 41.1622 0.0 111.583 High High
cufflinks 30.9881 0.0 82.0749    

0 Strain