Gene : Phvul.003G157800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24220:SF508 - ABC TRANSPORTER I FAMILY MEMBER 1 Genomic Order:  1604
Name:  ? Phvul.003G157800 Secondary Identifier:  ? PAC:37148299
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G157800 0.5kb upstream 0.5kb upstream 2261 true Chr03: 37403436-37405696 Phaseolus vulgaris
Phvul.003G157800 0.5kb upstream 0.5kb upstream 500 false Chr03: 37405197-37405696 Phaseolus vulgaris
Phvul.003G157800 0.5kb downstream 0.5kb downstream 2261 true Chr03: 37402936-37405196 Phaseolus vulgaris
Phvul.003G157800 0.5kb downstream 0.5kb downstream 500 false Chr03: 37402936-37403435 Phaseolus vulgaris
Phvul.003G157800 1.0kb upstream 1.0kb upstream 2761 true Chr03: 37403436-37406196 Phaseolus vulgaris
Phvul.003G157800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37405197-37406196 Phaseolus vulgaris
Phvul.003G157800 1.0kb downstream 1.0kb downstream 2761 true Chr03: 37402436-37405196 Phaseolus vulgaris
Phvul.003G157800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37402436-37403435 Phaseolus vulgaris
Phvul.003G157800 2.0kb upstream 2.0kb upstream 3761 true Chr03: 37403436-37407196 Phaseolus vulgaris
Phvul.003G157800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37405197-37407196 Phaseolus vulgaris
Phvul.003G157800 2.0kb downstream 2.0kb downstream 3761 true Chr03: 37401436-37405196 Phaseolus vulgaris
Phvul.003G157800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37401436-37403435 Phaseolus vulgaris
Phvul.003G157800 5.0kb upstream 5.0kb upstream 6761 true Chr03: 37403436-37410196 Phaseolus vulgaris
Phvul.003G157800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37405197-37410196 Phaseolus vulgaris
Phvul.003G157800 5.0kb downstream 5.0kb downstream 6761 true Chr03: 37398436-37405196 Phaseolus vulgaris
Phvul.003G157800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37398436-37403435 Phaseolus vulgaris
Phvul.003G157800 10.0kb upstream 10.0kb upstream 11761 true Chr03: 37403436-37415196 Phaseolus vulgaris
Phvul.003G157800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37405197-37415196 Phaseolus vulgaris
Phvul.003G157800 10.0kb downstream 10.0kb downstream 11761 true Chr03: 37393436-37405196 Phaseolus vulgaris
Phvul.003G157800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37393436-37403435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040954 5273 Angiosperm View MSA
122305077 5265 Fabidae View MSA
124062364 5270 Rosid View MSA
123737247 5271 Pentapetalae View MSA
122788728 5272 Eudicot View MSA
121344405 5274 Embryophyte View MSA
123380037 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.10362 0.0 14.0077   Low
cufflinks 3.85062 0.0 16.2481    
cufflinks 4.24754 0.0 17.868    
cufflinks 3.6414 0.0 16.4242    
cufflinks 5.94801 0.0 22.7224   High
cufflinks 2.97109 0.0 10.0004   Low
cufflinks 4.83282 0.0 19.0493    
cufflinks 5.53353 0.0 21.1905    
cufflinks 4.43501 0.0 17.8861    
cufflinks 7.19303 0.0 25.719   High
cufflinks 4.63835 0.0 18.6708    

0 Strain