Gene : Phvul.003G158800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11177//PTHR11177:SF208 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  1614
Name:  ? Phvul.003G158800 Secondary Identifier:  ? PAC:37146097
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G158800 0.5kb upstream 0.5kb upstream 2920 true Chr03: 37492278-37495197 Phaseolus vulgaris
Phvul.003G158800 0.5kb upstream 0.5kb upstream 500 false Chr03: 37492278-37492777 Phaseolus vulgaris
Phvul.003G158800 0.5kb downstream 0.5kb downstream 2920 true Chr03: 37492778-37495697 Phaseolus vulgaris
Phvul.003G158800 0.5kb downstream 0.5kb downstream 500 false Chr03: 37495198-37495697 Phaseolus vulgaris
Phvul.003G158800 1.0kb upstream 1.0kb upstream 3420 true Chr03: 37491778-37495197 Phaseolus vulgaris
Phvul.003G158800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37491778-37492777 Phaseolus vulgaris
Phvul.003G158800 1.0kb downstream 1.0kb downstream 3420 true Chr03: 37492778-37496197 Phaseolus vulgaris
Phvul.003G158800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37495198-37496197 Phaseolus vulgaris
Phvul.003G158800 2.0kb upstream 2.0kb upstream 4420 true Chr03: 37490778-37495197 Phaseolus vulgaris
Phvul.003G158800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37490778-37492777 Phaseolus vulgaris
Phvul.003G158800 2.0kb downstream 2.0kb downstream 4420 true Chr03: 37492778-37497197 Phaseolus vulgaris
Phvul.003G158800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37495198-37497197 Phaseolus vulgaris
Phvul.003G158800 5.0kb upstream 5.0kb upstream 7420 true Chr03: 37487778-37495197 Phaseolus vulgaris
Phvul.003G158800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37487778-37492777 Phaseolus vulgaris
Phvul.003G158800 5.0kb downstream 5.0kb downstream 7420 true Chr03: 37492778-37500197 Phaseolus vulgaris
Phvul.003G158800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37495198-37500197 Phaseolus vulgaris
Phvul.003G158800 10.0kb upstream 10.0kb upstream 12420 true Chr03: 37482778-37495197 Phaseolus vulgaris
Phvul.003G158800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37482778-37492777 Phaseolus vulgaris
Phvul.003G158800 10.0kb downstream 10.0kb downstream 12420 true Chr03: 37492778-37505197 Phaseolus vulgaris
Phvul.003G158800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37495198-37505197 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305195 5265 Fabidae View MSA
124073719 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.357028 0.0 1.3848 Low  
cufflinks 0.32896 0.0 1.29025 Low  
cufflinks 0.565088 0.0 2.13863    
cufflinks 0.274892 0.0 1.08654 Low  
cufflinks 1.0089 0.0 3.58066    
cufflinks 0.31916 0.0 1.2564 Low  
cufflinks 12.6935 0.0 34.3914   High
cufflinks 37.2285 0.0 96.2289 High High
cufflinks 3.71865 0.0 11.4715    
cufflinks 0.512888 0.0 1.93609    
cufflinks 0.857467 0.0 3.09037    

0 Strain