Gene : Phvul.003G157000 P. vulgaris v2.1
Defline:  (1 of 1) K18179 - cytochrome c oxidase assembly factor 6 (COA6) Genomic Order:  1596
Name:  ? Phvul.003G157000 Secondary Identifier:  ? PAC:37147734
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G157000 0.5kb upstream 0.5kb upstream 1675 true Chr03: 37333658-37335332 Phaseolus vulgaris
Phvul.003G157000 0.5kb upstream 0.5kb upstream 500 false Chr03: 37333658-37334157 Phaseolus vulgaris
Phvul.003G157000 0.5kb downstream 0.5kb downstream 1675 true Chr03: 37334158-37335832 Phaseolus vulgaris
Phvul.003G157000 0.5kb downstream 0.5kb downstream 500 false Chr03: 37335333-37335832 Phaseolus vulgaris
Phvul.003G157000 1.0kb upstream 1.0kb upstream 2175 true Chr03: 37333158-37335332 Phaseolus vulgaris
Phvul.003G157000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37333158-37334157 Phaseolus vulgaris
Phvul.003G157000 1.0kb downstream 1.0kb downstream 2175 true Chr03: 37334158-37336332 Phaseolus vulgaris
Phvul.003G157000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37335333-37336332 Phaseolus vulgaris
Phvul.003G157000 2.0kb upstream 2.0kb upstream 3175 true Chr03: 37332158-37335332 Phaseolus vulgaris
Phvul.003G157000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37332158-37334157 Phaseolus vulgaris
Phvul.003G157000 2.0kb downstream 2.0kb downstream 3175 true Chr03: 37334158-37337332 Phaseolus vulgaris
Phvul.003G157000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37335333-37337332 Phaseolus vulgaris
Phvul.003G157000 5.0kb upstream 5.0kb upstream 6175 true Chr03: 37329158-37335332 Phaseolus vulgaris
Phvul.003G157000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37329158-37334157 Phaseolus vulgaris
Phvul.003G157000 5.0kb downstream 5.0kb downstream 6175 true Chr03: 37334158-37340332 Phaseolus vulgaris
Phvul.003G157000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37335333-37340332 Phaseolus vulgaris
Phvul.003G157000 10.0kb upstream 10.0kb upstream 11175 true Chr03: 37324158-37335332 Phaseolus vulgaris
Phvul.003G157000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37324158-37334157 Phaseolus vulgaris
Phvul.003G157000 10.0kb downstream 10.0kb downstream 11175 true Chr03: 37334158-37345332 Phaseolus vulgaris
Phvul.003G157000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37335333-37345332 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304645 5265 Fabidae View MSA
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.60648 0.0 24.1007    
cufflinks 5.21129 0.0 17.2775    
cufflinks 8.66786 0.0 27.0754   High
cufflinks 11.5946 0.0 35.2158   High
cufflinks 3.66494 0.0 12.7084   Low
cufflinks 6.09874 0.0 19.8618    
cufflinks 4.47942 0.0 15.0778    
cufflinks 4.1074 0.0 13.9755    
cufflinks 4.71626 0.0 15.8014    
cufflinks 4.89145 0.0 16.3841    
cufflinks 5.07756 0.0 16.9518    

0 Strain