Gene : Phvul.003G148000 P. vulgaris v2.1
Defline:  (1 of 1) 2.7.1.16 - Ribulokinase / L-ribulokinase Genomic Order:  1503
Name:  ? Phvul.003G148000 Secondary Identifier:  ? PAC:37147766
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G148000 0.5kb upstream 0.5kb upstream 17971 true Chr03: 35847690-35865660 Phaseolus vulgaris
Phvul.003G148000 0.5kb upstream 0.5kb upstream 500 false Chr03: 35847690-35848189 Phaseolus vulgaris
Phvul.003G148000 0.5kb downstream 0.5kb downstream 17971 true Chr03: 35848190-35866160 Phaseolus vulgaris
Phvul.003G148000 0.5kb downstream 0.5kb downstream 500 false Chr03: 35865661-35866160 Phaseolus vulgaris
Phvul.003G148000 1.0kb upstream 1.0kb upstream 18471 true Chr03: 35847190-35865660 Phaseolus vulgaris
Phvul.003G148000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35847190-35848189 Phaseolus vulgaris
Phvul.003G148000 1.0kb downstream 1.0kb downstream 18471 true Chr03: 35848190-35866660 Phaseolus vulgaris
Phvul.003G148000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35865661-35866660 Phaseolus vulgaris
Phvul.003G148000 2.0kb upstream 2.0kb upstream 19471 true Chr03: 35846190-35865660 Phaseolus vulgaris
Phvul.003G148000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35846190-35848189 Phaseolus vulgaris
Phvul.003G148000 2.0kb downstream 2.0kb downstream 19471 true Chr03: 35848190-35867660 Phaseolus vulgaris
Phvul.003G148000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35865661-35867660 Phaseolus vulgaris
Phvul.003G148000 5.0kb upstream 5.0kb upstream 22471 true Chr03: 35843190-35865660 Phaseolus vulgaris
Phvul.003G148000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35843190-35848189 Phaseolus vulgaris
Phvul.003G148000 5.0kb downstream 5.0kb downstream 22471 true Chr03: 35848190-35870660 Phaseolus vulgaris
Phvul.003G148000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35865661-35870660 Phaseolus vulgaris
Phvul.003G148000 10.0kb upstream 10.0kb upstream 27471 true Chr03: 35838190-35865660 Phaseolus vulgaris
Phvul.003G148000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35838190-35848189 Phaseolus vulgaris
Phvul.003G148000 10.0kb downstream 10.0kb downstream 27471 true Chr03: 35848190-35875660 Phaseolus vulgaris
Phvul.003G148000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35865661-35875660 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303808 5265 Fabidae View MSA
124063761 5270 Rosid View MSA
123740557 5271 Pentapetalae View MSA
122792560 5272 Eudicot View MSA
122044620 5273 Angiosperm View MSA
121349979 5274 Embryophyte View MSA
123427238 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.31645 0.0 19.6784    
cufflinks 7.79302 0.0 20.8621    
cufflinks 26.3327 0.0 68.4165   High
cufflinks 4.50839 0.0 12.735   Low
cufflinks 7.36085 0.0 19.8501    
cufflinks 13.0773 0.0 34.0052    
cufflinks 7.51419 0.0 20.1836    
cufflinks 7.37221 0.0 19.7916    
cufflinks 5.30124 0.0 14.692    
cufflinks 20.085 0.0 51.9275   High
cufflinks 6.70138 0.0 18.2061    

0 Strain