Gene : Phvul.003G149900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  1523
Name:  ? Phvul.003G149900 Secondary Identifier:  ? PAC:37148018
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G149900 0.5kb upstream 0.5kb upstream 7153 true Chr03: 36265240-36272392 Phaseolus vulgaris
Phvul.003G149900 0.5kb upstream 0.5kb upstream 500 false Chr03: 36271893-36272392 Phaseolus vulgaris
Phvul.003G149900 0.5kb downstream 0.5kb downstream 7153 true Chr03: 36264740-36271892 Phaseolus vulgaris
Phvul.003G149900 0.5kb downstream 0.5kb downstream 500 false Chr03: 36264740-36265239 Phaseolus vulgaris
Phvul.003G149900 1.0kb upstream 1.0kb upstream 7653 true Chr03: 36265240-36272892 Phaseolus vulgaris
Phvul.003G149900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36271893-36272892 Phaseolus vulgaris
Phvul.003G149900 1.0kb downstream 1.0kb downstream 7653 true Chr03: 36264240-36271892 Phaseolus vulgaris
Phvul.003G149900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36264240-36265239 Phaseolus vulgaris
Phvul.003G149900 2.0kb upstream 2.0kb upstream 8653 true Chr03: 36265240-36273892 Phaseolus vulgaris
Phvul.003G149900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36271893-36273892 Phaseolus vulgaris
Phvul.003G149900 2.0kb downstream 2.0kb downstream 8653 true Chr03: 36263240-36271892 Phaseolus vulgaris
Phvul.003G149900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36263240-36265239 Phaseolus vulgaris
Phvul.003G149900 5.0kb upstream 5.0kb upstream 11653 true Chr03: 36265240-36276892 Phaseolus vulgaris
Phvul.003G149900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36271893-36276892 Phaseolus vulgaris
Phvul.003G149900 5.0kb downstream 5.0kb downstream 11653 true Chr03: 36260240-36271892 Phaseolus vulgaris
Phvul.003G149900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36260240-36265239 Phaseolus vulgaris
Phvul.003G149900 10.0kb upstream 10.0kb upstream 16653 true Chr03: 36265240-36281892 Phaseolus vulgaris
Phvul.003G149900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36271893-36281892 Phaseolus vulgaris
Phvul.003G149900 10.0kb downstream 10.0kb downstream 16653 true Chr03: 36255240-36271892 Phaseolus vulgaris
Phvul.003G149900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36255240-36265239 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305602 5265 Fabidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.78773 0.0 19.6223   High
cufflinks 4.3231 0.0 13.1271    
cufflinks 5.54777 0.0 16.4472    
cufflinks 6.35039 0.0 18.4715   High
cufflinks 5.39465 0.0 16.0072    
cufflinks 4.2826 0.0 13.0554    
cufflinks 4.39202 0.0 13.2653    
cufflinks 4.43378 0.0 13.4302    
cufflinks 4.96944 0.0 14.7993    
cufflinks 4.01667 0.0 12.3011   Low
cufflinks 6.15778 0.0 17.9409   High

0 Strain