Gene : Phvul.003G150000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  1524
Name:  ? Phvul.003G150000 Secondary Identifier:  ? PAC:37144404
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G150000 0.5kb upstream 0.5kb upstream 4064 true Chr03: 36278795-36282858 Phaseolus vulgaris
Phvul.003G150000 0.5kb upstream 0.5kb upstream 500 false Chr03: 36278795-36279294 Phaseolus vulgaris
Phvul.003G150000 0.5kb downstream 0.5kb downstream 4064 true Chr03: 36279295-36283358 Phaseolus vulgaris
Phvul.003G150000 0.5kb downstream 0.5kb downstream 500 false Chr03: 36282859-36283358 Phaseolus vulgaris
Phvul.003G150000 1.0kb upstream 1.0kb upstream 4564 true Chr03: 36278295-36282858 Phaseolus vulgaris
Phvul.003G150000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36278295-36279294 Phaseolus vulgaris
Phvul.003G150000 1.0kb downstream 1.0kb downstream 4564 true Chr03: 36279295-36283858 Phaseolus vulgaris
Phvul.003G150000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36282859-36283858 Phaseolus vulgaris
Phvul.003G150000 2.0kb upstream 2.0kb upstream 5564 true Chr03: 36277295-36282858 Phaseolus vulgaris
Phvul.003G150000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36277295-36279294 Phaseolus vulgaris
Phvul.003G150000 2.0kb downstream 2.0kb downstream 5564 true Chr03: 36279295-36284858 Phaseolus vulgaris
Phvul.003G150000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36282859-36284858 Phaseolus vulgaris
Phvul.003G150000 5.0kb upstream 5.0kb upstream 8564 true Chr03: 36274295-36282858 Phaseolus vulgaris
Phvul.003G150000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36274295-36279294 Phaseolus vulgaris
Phvul.003G150000 5.0kb downstream 5.0kb downstream 8564 true Chr03: 36279295-36287858 Phaseolus vulgaris
Phvul.003G150000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36282859-36287858 Phaseolus vulgaris
Phvul.003G150000 10.0kb upstream 10.0kb upstream 13564 true Chr03: 36269295-36282858 Phaseolus vulgaris
Phvul.003G150000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36269295-36279294 Phaseolus vulgaris
Phvul.003G150000 10.0kb downstream 10.0kb downstream 13564 true Chr03: 36279295-36292858 Phaseolus vulgaris
Phvul.003G150000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36282859-36292858 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304971 5265 Fabidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46883 0.0 7.3992   Low
cufflinks 2.00268 0.0 11.1657    
cufflinks 2.7288 0.0 11.7573    
cufflinks 2.26409 0.0 12.383    
cufflinks 1.79388 0.0 8.8555    
cufflinks 2.84996 0.0 12.0838    
cufflinks 3.81508 0.0 17.596   High
cufflinks 3.51775 0.0 16.3986   High
cufflinks 4.15755 0.0 16.2549   High
cufflinks 1.71937 0.0 10.2378   Low
cufflinks 2.39876 0.0 10.804    

0 Strain