Gene : Phvul.003G150200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  1525
Name:  ? Phvul.003G150200 Secondary Identifier:  ? PAC:37144642
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G150200 0.5kb upstream 0.5kb upstream 4350 true Chr03: 36291819-36296168 Phaseolus vulgaris
Phvul.003G150200 0.5kb upstream 0.5kb upstream 500 false Chr03: 36291819-36292318 Phaseolus vulgaris
Phvul.003G150200 0.5kb downstream 0.5kb downstream 4350 true Chr03: 36292319-36296668 Phaseolus vulgaris
Phvul.003G150200 0.5kb downstream 0.5kb downstream 500 false Chr03: 36296169-36296668 Phaseolus vulgaris
Phvul.003G150200 1.0kb upstream 1.0kb upstream 4850 true Chr03: 36291319-36296168 Phaseolus vulgaris
Phvul.003G150200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36291319-36292318 Phaseolus vulgaris
Phvul.003G150200 1.0kb downstream 1.0kb downstream 4850 true Chr03: 36292319-36297168 Phaseolus vulgaris
Phvul.003G150200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36296169-36297168 Phaseolus vulgaris
Phvul.003G150200 2.0kb upstream 2.0kb upstream 5850 true Chr03: 36290319-36296168 Phaseolus vulgaris
Phvul.003G150200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36290319-36292318 Phaseolus vulgaris
Phvul.003G150200 2.0kb downstream 2.0kb downstream 5850 true Chr03: 36292319-36298168 Phaseolus vulgaris
Phvul.003G150200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36296169-36298168 Phaseolus vulgaris
Phvul.003G150200 5.0kb upstream 5.0kb upstream 8850 true Chr03: 36287319-36296168 Phaseolus vulgaris
Phvul.003G150200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36287319-36292318 Phaseolus vulgaris
Phvul.003G150200 5.0kb downstream 5.0kb downstream 8850 true Chr03: 36292319-36301168 Phaseolus vulgaris
Phvul.003G150200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36296169-36301168 Phaseolus vulgaris
Phvul.003G150200 10.0kb upstream 10.0kb upstream 13850 true Chr03: 36282319-36296168 Phaseolus vulgaris
Phvul.003G150200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36282319-36292318 Phaseolus vulgaris
Phvul.003G150200 10.0kb downstream 10.0kb downstream 13850 true Chr03: 36292319-36306168 Phaseolus vulgaris
Phvul.003G150200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36296169-36306168 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297380 5265 Fabidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.62329 0.0 8.04598    
cufflinks 2.36284 0.0 15.2622    
cufflinks 0.739331 0.0 3.24389   Low
cufflinks 1.07517 0.0 7.37911    
cufflinks 1.17832 0.0 6.67652    
cufflinks 0.9795 0.0 5.6097    
cufflinks 5.88022 0.0 25.8001    
cufflinks 34.8927 0.0 126.4 High High
cufflinks 1.87246 0.0 8.92932    
cufflinks 4.24848 0.0 16.8959    
cufflinks 1.84009 0.0 9.14351    

0 Strain