Gene : Phvul.003G152400 P. vulgaris v2.1
Defline:  (1 of 2) K07023 - putative hydrolases of HD superfamily (K07023) Genomic Order:  1547
Name:  ? Phvul.003G152400 Secondary Identifier:  ? PAC:37148413
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G152400 0.5kb upstream 0.5kb upstream 4374 true Chr03: 36733438-36737811 Phaseolus vulgaris
Phvul.003G152400 0.5kb upstream 0.5kb upstream 500 false Chr03: 36733438-36733937 Phaseolus vulgaris
Phvul.003G152400 0.5kb downstream 0.5kb downstream 4374 true Chr03: 36733938-36738311 Phaseolus vulgaris
Phvul.003G152400 0.5kb downstream 0.5kb downstream 500 false Chr03: 36737812-36738311 Phaseolus vulgaris
Phvul.003G152400 1.0kb upstream 1.0kb upstream 4874 true Chr03: 36732938-36737811 Phaseolus vulgaris
Phvul.003G152400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36732938-36733937 Phaseolus vulgaris
Phvul.003G152400 1.0kb downstream 1.0kb downstream 4874 true Chr03: 36733938-36738811 Phaseolus vulgaris
Phvul.003G152400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36737812-36738811 Phaseolus vulgaris
Phvul.003G152400 2.0kb upstream 2.0kb upstream 5874 true Chr03: 36731938-36737811 Phaseolus vulgaris
Phvul.003G152400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36731938-36733937 Phaseolus vulgaris
Phvul.003G152400 2.0kb downstream 2.0kb downstream 5874 true Chr03: 36733938-36739811 Phaseolus vulgaris
Phvul.003G152400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36737812-36739811 Phaseolus vulgaris
Phvul.003G152400 5.0kb upstream 5.0kb upstream 8874 true Chr03: 36728938-36737811 Phaseolus vulgaris
Phvul.003G152400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36728938-36733937 Phaseolus vulgaris
Phvul.003G152400 5.0kb downstream 5.0kb downstream 8874 true Chr03: 36733938-36742811 Phaseolus vulgaris
Phvul.003G152400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36737812-36742811 Phaseolus vulgaris
Phvul.003G152400 10.0kb upstream 10.0kb upstream 13874 true Chr03: 36723938-36737811 Phaseolus vulgaris
Phvul.003G152400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36723938-36733937 Phaseolus vulgaris
Phvul.003G152400 10.0kb downstream 10.0kb downstream 13874 true Chr03: 36733938-36747811 Phaseolus vulgaris
Phvul.003G152400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36737812-36747811 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305731 5265 Fabidae View MSA
124037188 5270 Rosid View MSA
123753456 5271 Pentapetalae View MSA
122786210 5272 Eudicot View MSA
122044292 5273 Angiosperm View MSA
121348653 5274 Embryophyte View MSA
123428569 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.67118 0.0 22.0918    
cufflinks 14.5212 0.0 39.6059   High
cufflinks 9.57219 0.0 27.1002    
cufflinks 11.254 0.0 31.5125   High
cufflinks 6.73758 0.0 19.9535    
cufflinks 11.1081 0.0 31.0291    
cufflinks 4.67737 0.0 14.3145   Low
cufflinks 5.2235 0.0 15.7224   Low
cufflinks 5.70661 0.0 17.0978    
cufflinks 5.87267 0.0 17.5377    
cufflinks 8.44039 0.0 24.3004    

0 Strain