Gene : Phvul.003G152500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  1548
Name:  ? Phvul.003G152500 Secondary Identifier:  ? PAC:37145679
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5695 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6596 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6608 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7185 Phaseolus vulgaris pathologic  
Pvulgaris SALVADEHYPOX-PWY Phaseolus vulgaris pathologic  
Pvulgaris URSIN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G152500 0.5kb upstream 0.5kb upstream 9275 true Chr03: 36739474-36748748 Phaseolus vulgaris
Phvul.003G152500 0.5kb upstream 0.5kb upstream 500 false Chr03: 36739474-36739973 Phaseolus vulgaris
Phvul.003G152500 0.5kb downstream 0.5kb downstream 9275 true Chr03: 36739974-36749248 Phaseolus vulgaris
Phvul.003G152500 0.5kb downstream 0.5kb downstream 500 false Chr03: 36748749-36749248 Phaseolus vulgaris
Phvul.003G152500 1.0kb upstream 1.0kb upstream 9775 true Chr03: 36738974-36748748 Phaseolus vulgaris
Phvul.003G152500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36738974-36739973 Phaseolus vulgaris
Phvul.003G152500 1.0kb downstream 1.0kb downstream 9775 true Chr03: 36739974-36749748 Phaseolus vulgaris
Phvul.003G152500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36748749-36749748 Phaseolus vulgaris
Phvul.003G152500 2.0kb upstream 2.0kb upstream 10775 true Chr03: 36737974-36748748 Phaseolus vulgaris
Phvul.003G152500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36737974-36739973 Phaseolus vulgaris
Phvul.003G152500 2.0kb downstream 2.0kb downstream 10775 true Chr03: 36739974-36750748 Phaseolus vulgaris
Phvul.003G152500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36748749-36750748 Phaseolus vulgaris
Phvul.003G152500 5.0kb upstream 5.0kb upstream 13775 true Chr03: 36734974-36748748 Phaseolus vulgaris
Phvul.003G152500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36734974-36739973 Phaseolus vulgaris
Phvul.003G152500 5.0kb downstream 5.0kb downstream 13775 true Chr03: 36739974-36753748 Phaseolus vulgaris
Phvul.003G152500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36748749-36753748 Phaseolus vulgaris
Phvul.003G152500 10.0kb upstream 10.0kb upstream 18775 true Chr03: 36729974-36748748 Phaseolus vulgaris
Phvul.003G152500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36729974-36739973 Phaseolus vulgaris
Phvul.003G152500 10.0kb downstream 10.0kb downstream 18775 true Chr03: 36739974-36758748 Phaseolus vulgaris
Phvul.003G152500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36748749-36758748 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299065 5265 Fabidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.31719 0.0 7.19907    
cufflinks 2.21469 0.0 6.91169    
cufflinks 5.07802 0.0 14.409   High
cufflinks 1.35388 0.0 4.49223   Low
cufflinks 2.08665 0.0 6.60814    
cufflinks 2.31794 0.0 7.19263    
cufflinks 2.02661 0.0 6.39179    
cufflinks 1.72341 0.0 5.50804    
cufflinks 1.89601 0.0 6.04161    
cufflinks 2.74229 0.0 8.35155    
cufflinks 2.1588 0.0 6.79397    

0 Strain