Gene : Phvul.003G151000 P. vulgaris v2.1
Defline:  (1 of 1) K05286 - phosphatidylinositol glycan, class B (PIGB) Genomic Order:  1533
Name:  ? Phvul.003G151000 Secondary Identifier:  ? PAC:37146068
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G151000 0.5kb upstream 0.5kb upstream 4767 true Chr03: 36498498-36503264 Phaseolus vulgaris
Phvul.003G151000 0.5kb upstream 0.5kb upstream 500 false Chr03: 36498498-36498997 Phaseolus vulgaris
Phvul.003G151000 0.5kb downstream 0.5kb downstream 4767 true Chr03: 36498998-36503764 Phaseolus vulgaris
Phvul.003G151000 0.5kb downstream 0.5kb downstream 500 false Chr03: 36503265-36503764 Phaseolus vulgaris
Phvul.003G151000 1.0kb upstream 1.0kb upstream 5267 true Chr03: 36497998-36503264 Phaseolus vulgaris
Phvul.003G151000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36497998-36498997 Phaseolus vulgaris
Phvul.003G151000 1.0kb downstream 1.0kb downstream 5267 true Chr03: 36498998-36504264 Phaseolus vulgaris
Phvul.003G151000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36503265-36504264 Phaseolus vulgaris
Phvul.003G151000 2.0kb upstream 2.0kb upstream 6267 true Chr03: 36496998-36503264 Phaseolus vulgaris
Phvul.003G151000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36496998-36498997 Phaseolus vulgaris
Phvul.003G151000 2.0kb downstream 2.0kb downstream 6267 true Chr03: 36498998-36505264 Phaseolus vulgaris
Phvul.003G151000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36503265-36505264 Phaseolus vulgaris
Phvul.003G151000 5.0kb upstream 5.0kb upstream 9267 true Chr03: 36493998-36503264 Phaseolus vulgaris
Phvul.003G151000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36493998-36498997 Phaseolus vulgaris
Phvul.003G151000 5.0kb downstream 5.0kb downstream 9267 true Chr03: 36498998-36508264 Phaseolus vulgaris
Phvul.003G151000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36503265-36508264 Phaseolus vulgaris
Phvul.003G151000 10.0kb upstream 10.0kb upstream 14267 true Chr03: 36488998-36503264 Phaseolus vulgaris
Phvul.003G151000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36488998-36498997 Phaseolus vulgaris
Phvul.003G151000 10.0kb downstream 10.0kb downstream 14267 true Chr03: 36498998-36513264 Phaseolus vulgaris
Phvul.003G151000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36503265-36513264 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299140 5265 Fabidae View MSA
124065549 5270 Rosid View MSA
123737341 5271 Pentapetalae View MSA
122796897 5272 Eudicot View MSA
122042871 5273 Angiosperm View MSA
121346274 5274 Embryophyte View MSA
123425289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.71378 0.0 13.5693    
cufflinks 6.61157 0.0 18.4677    
cufflinks 7.05897 0.0 19.5879    
cufflinks 4.76888 0.0 13.7691    
cufflinks 8.04275 0.0 22.1153    
cufflinks 4.66699 0.0 13.4944    
cufflinks 5.27913 0.0 15.0543    
cufflinks 6.55984 0.0 18.2701    
cufflinks 6.13709 0.0 17.2891    
cufflinks 12.7995 0.0 33.8906   High
cufflinks 4.45828 0.0 13.0018   Low

0 Strain