Gene : Phvul.003G153800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13222 - CGTHBA PROTEIN -14 GENE PROTEIN Genomic Order:  1561
Name:  ? Phvul.003G153800 Secondary Identifier:  ? PAC:37147907
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G153800 0.5kb upstream 0.5kb upstream 7286 true Chr03: 36865951-36873236 Phaseolus vulgaris
Phvul.003G153800 0.5kb upstream 0.5kb upstream 500 false Chr03: 36872737-36873236 Phaseolus vulgaris
Phvul.003G153800 0.5kb downstream 0.5kb downstream 7286 true Chr03: 36865451-36872736 Phaseolus vulgaris
Phvul.003G153800 0.5kb downstream 0.5kb downstream 500 false Chr03: 36865451-36865950 Phaseolus vulgaris
Phvul.003G153800 1.0kb upstream 1.0kb upstream 7786 true Chr03: 36865951-36873736 Phaseolus vulgaris
Phvul.003G153800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36872737-36873736 Phaseolus vulgaris
Phvul.003G153800 1.0kb downstream 1.0kb downstream 7786 true Chr03: 36864951-36872736 Phaseolus vulgaris
Phvul.003G153800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36864951-36865950 Phaseolus vulgaris
Phvul.003G153800 2.0kb upstream 2.0kb upstream 8786 true Chr03: 36865951-36874736 Phaseolus vulgaris
Phvul.003G153800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36872737-36874736 Phaseolus vulgaris
Phvul.003G153800 2.0kb downstream 2.0kb downstream 8786 true Chr03: 36863951-36872736 Phaseolus vulgaris
Phvul.003G153800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36863951-36865950 Phaseolus vulgaris
Phvul.003G153800 5.0kb upstream 5.0kb upstream 11786 true Chr03: 36865951-36877736 Phaseolus vulgaris
Phvul.003G153800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36872737-36877736 Phaseolus vulgaris
Phvul.003G153800 5.0kb downstream 5.0kb downstream 11786 true Chr03: 36860951-36872736 Phaseolus vulgaris
Phvul.003G153800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36860951-36865950 Phaseolus vulgaris
Phvul.003G153800 10.0kb upstream 10.0kb upstream 16786 true Chr03: 36865951-36882736 Phaseolus vulgaris
Phvul.003G153800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36872737-36882736 Phaseolus vulgaris
Phvul.003G153800 10.0kb downstream 10.0kb downstream 16786 true Chr03: 36855951-36872736 Phaseolus vulgaris
Phvul.003G153800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36855951-36865950 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306355 5265 Fabidae View MSA
124067253 5270 Rosid View MSA
123739530 5271 Pentapetalae View MSA
122788917 5272 Eudicot View MSA
122042921 5273 Angiosperm View MSA
121347575 5274 Embryophyte View MSA
123423809 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.66117 0.0 17.3004    
cufflinks 4.8126 0.0 12.7103    
cufflinks 6.09247 0.0 15.8719    
cufflinks 2.06713 0.0 5.90783   Low
cufflinks 5.22307 0.0 13.7804    
cufflinks 8.15262 0.0 21.0952    
cufflinks 11.9621 0.0 30.9892   High
cufflinks 8.74236 0.0 22.5983    
cufflinks 8.88244 0.0 22.9725    
cufflinks 5.5999 0.0 14.6629    
cufflinks 4.89125 0.0 12.9449    

0 Strain