Gene : Phvul.003G139900 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1423
Name:  ? Phvul.003G139900 Secondary Identifier:  ? PAC:37144640
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G139900 0.5kb upstream 0.5kb upstream 1019 true Chr03: 34269167-34270185 Phaseolus vulgaris
Phvul.003G139900 0.5kb upstream 0.5kb upstream 500 false Chr03: 34269686-34270185 Phaseolus vulgaris
Phvul.003G139900 0.5kb downstream 0.5kb downstream 1019 true Chr03: 34268667-34269685 Phaseolus vulgaris
Phvul.003G139900 0.5kb downstream 0.5kb downstream 500 false Chr03: 34268667-34269166 Phaseolus vulgaris
Phvul.003G139900 1.0kb upstream 1.0kb upstream 1519 true Chr03: 34269167-34270685 Phaseolus vulgaris
Phvul.003G139900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34269686-34270685 Phaseolus vulgaris
Phvul.003G139900 1.0kb downstream 1.0kb downstream 1519 true Chr03: 34268167-34269685 Phaseolus vulgaris
Phvul.003G139900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34268167-34269166 Phaseolus vulgaris
Phvul.003G139900 2.0kb upstream 2.0kb upstream 2519 true Chr03: 34269167-34271685 Phaseolus vulgaris
Phvul.003G139900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34269686-34271685 Phaseolus vulgaris
Phvul.003G139900 2.0kb downstream 2.0kb downstream 2519 true Chr03: 34267167-34269685 Phaseolus vulgaris
Phvul.003G139900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34267167-34269166 Phaseolus vulgaris
Phvul.003G139900 5.0kb upstream 5.0kb upstream 5519 true Chr03: 34269167-34274685 Phaseolus vulgaris
Phvul.003G139900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34269686-34274685 Phaseolus vulgaris
Phvul.003G139900 5.0kb downstream 5.0kb downstream 5519 true Chr03: 34264167-34269685 Phaseolus vulgaris
Phvul.003G139900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34264167-34269166 Phaseolus vulgaris
Phvul.003G139900 10.0kb upstream 10.0kb upstream 10519 true Chr03: 34269167-34279685 Phaseolus vulgaris
Phvul.003G139900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34269686-34279685 Phaseolus vulgaris
Phvul.003G139900 10.0kb downstream 10.0kb downstream 10519 true Chr03: 34259167-34269685 Phaseolus vulgaris
Phvul.003G139900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34259167-34269166 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311915 5265 Fabidae View MSA
124073225 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain