Gene : Phvul.003G142700 P. vulgaris v2.1
Defline:  (1 of 2) 3.6.3.5 - Zinc-exporting ATPase / Zn(2+)-exporting ATPase Genomic Order:  1393
Name:  ? Phvul.003G142700 Secondary Identifier:  ? PAC:37144435
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G142700 0.5kb upstream 0.5kb upstream 10053 true Chr03: 33788752-33798804 Phaseolus vulgaris
Phvul.003G142700 0.5kb upstream 0.5kb upstream 500 false Chr03: 33788752-33789251 Phaseolus vulgaris
Phvul.003G142700 0.5kb downstream 0.5kb downstream 10053 true Chr03: 33789252-33799304 Phaseolus vulgaris
Phvul.003G142700 0.5kb downstream 0.5kb downstream 500 false Chr03: 33798805-33799304 Phaseolus vulgaris
Phvul.003G142700 1.0kb upstream 1.0kb upstream 10553 true Chr03: 33788252-33798804 Phaseolus vulgaris
Phvul.003G142700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33788252-33789251 Phaseolus vulgaris
Phvul.003G142700 1.0kb downstream 1.0kb downstream 10553 true Chr03: 33789252-33799804 Phaseolus vulgaris
Phvul.003G142700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33798805-33799804 Phaseolus vulgaris
Phvul.003G142700 2.0kb upstream 2.0kb upstream 11553 true Chr03: 33787252-33798804 Phaseolus vulgaris
Phvul.003G142700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33787252-33789251 Phaseolus vulgaris
Phvul.003G142700 2.0kb downstream 2.0kb downstream 11553 true Chr03: 33789252-33800804 Phaseolus vulgaris
Phvul.003G142700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33798805-33800804 Phaseolus vulgaris
Phvul.003G142700 5.0kb upstream 5.0kb upstream 14553 true Chr03: 33784252-33798804 Phaseolus vulgaris
Phvul.003G142700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33784252-33789251 Phaseolus vulgaris
Phvul.003G142700 5.0kb downstream 5.0kb downstream 14553 true Chr03: 33789252-33803804 Phaseolus vulgaris
Phvul.003G142700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33798805-33803804 Phaseolus vulgaris
Phvul.003G142700 10.0kb upstream 10.0kb upstream 19553 true Chr03: 33779252-33798804 Phaseolus vulgaris
Phvul.003G142700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33779252-33789251 Phaseolus vulgaris
Phvul.003G142700 10.0kb downstream 10.0kb downstream 19553 true Chr03: 33789252-33808804 Phaseolus vulgaris
Phvul.003G142700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33798805-33808804 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306244 5265 Fabidae View MSA
124069741 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5827 0.0 35.1592   High
cufflinks 5.92825 0.0 15.6115    
cufflinks 3.62274 0.0 9.88715   Low
cufflinks 3.05763 0.0 8.53748   Low
cufflinks 10.5933 0.0 27.402    
cufflinks 2.50711 0.0 7.0835   Low
cufflinks 6.78153 0.0 17.7128    
cufflinks 7.25751 0.0 18.8814    
cufflinks 10.7174 0.0 27.7034    
cufflinks 15.2512 0.0 39.5741   High
cufflinks 7.28763 0.0 19.0315    

0 Strain