Gene : Phvul.003G136700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12072:SF4 - CWF19-LIKE PROTEIN 1 Genomic Order:  1371
Name:  ? Phvul.003G136700 Secondary Identifier:  ? PAC:37147618
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G136700 0.5kb upstream 0.5kb upstream 6740 true Chr03: 33476082-33482821 Phaseolus vulgaris
Phvul.003G136700 0.5kb upstream 0.5kb upstream 500 false Chr03: 33476082-33476581 Phaseolus vulgaris
Phvul.003G136700 0.5kb downstream 0.5kb downstream 6740 true Chr03: 33476582-33483321 Phaseolus vulgaris
Phvul.003G136700 0.5kb downstream 0.5kb downstream 500 false Chr03: 33482822-33483321 Phaseolus vulgaris
Phvul.003G136700 1.0kb upstream 1.0kb upstream 7240 true Chr03: 33475582-33482821 Phaseolus vulgaris
Phvul.003G136700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33475582-33476581 Phaseolus vulgaris
Phvul.003G136700 1.0kb downstream 1.0kb downstream 7240 true Chr03: 33476582-33483821 Phaseolus vulgaris
Phvul.003G136700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33482822-33483821 Phaseolus vulgaris
Phvul.003G136700 2.0kb upstream 2.0kb upstream 8240 true Chr03: 33474582-33482821 Phaseolus vulgaris
Phvul.003G136700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33474582-33476581 Phaseolus vulgaris
Phvul.003G136700 2.0kb downstream 2.0kb downstream 8240 true Chr03: 33476582-33484821 Phaseolus vulgaris
Phvul.003G136700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33482822-33484821 Phaseolus vulgaris
Phvul.003G136700 5.0kb upstream 5.0kb upstream 11240 true Chr03: 33471582-33482821 Phaseolus vulgaris
Phvul.003G136700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33471582-33476581 Phaseolus vulgaris
Phvul.003G136700 5.0kb downstream 5.0kb downstream 11240 true Chr03: 33476582-33487821 Phaseolus vulgaris
Phvul.003G136700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33482822-33487821 Phaseolus vulgaris
Phvul.003G136700 10.0kb upstream 10.0kb upstream 16240 true Chr03: 33466582-33482821 Phaseolus vulgaris
Phvul.003G136700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33466582-33476581 Phaseolus vulgaris
Phvul.003G136700 10.0kb downstream 10.0kb downstream 16240 true Chr03: 33476582-33492821 Phaseolus vulgaris
Phvul.003G136700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33482822-33492821 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026236 5273 Angiosperm View MSA
122305547 5265 Fabidae View MSA
124062399 5270 Rosid View MSA
123739435 5271 Pentapetalae View MSA
122790763 5272 Eudicot View MSA
121344253 5274 Embryophyte View MSA
123426244 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95367 0.0 10.796   Low
cufflinks 5.11726 0.0 16.5875    
cufflinks 5.5677 0.0 17.6809    
cufflinks 3.78608 0.0 13.8154   Low
cufflinks 4.98867 0.0 16.412    
cufflinks 6.59094 0.0 23.3907    
cufflinks 7.07066 0.0 24.7288   High
cufflinks 7.10708 0.0 24.6916   High
cufflinks 6.70044 0.0 20.648    
cufflinks 5.61964 0.0 20.5973    
cufflinks 5.05951 0.0 17.1798    

0 Strain