Gene : Phvul.003G136400 P. vulgaris v2.1
Defline:  (1 of 4) PTHR13878//PTHR13878:SF14 - GULONOLACTONE OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  1368
Name:  ? Phvul.003G136400 Secondary Identifier:  ? PAC:37148409
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G136400 0.5kb upstream 0.5kb upstream 4416 true Chr03: 33414255-33418670 Phaseolus vulgaris
Phvul.003G136400 0.5kb upstream 0.5kb upstream 500 false Chr03: 33414255-33414754 Phaseolus vulgaris
Phvul.003G136400 0.5kb downstream 0.5kb downstream 4416 true Chr03: 33414755-33419170 Phaseolus vulgaris
Phvul.003G136400 0.5kb downstream 0.5kb downstream 500 false Chr03: 33418671-33419170 Phaseolus vulgaris
Phvul.003G136400 1.0kb upstream 1.0kb upstream 4916 true Chr03: 33413755-33418670 Phaseolus vulgaris
Phvul.003G136400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33413755-33414754 Phaseolus vulgaris
Phvul.003G136400 1.0kb downstream 1.0kb downstream 4916 true Chr03: 33414755-33419670 Phaseolus vulgaris
Phvul.003G136400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33418671-33419670 Phaseolus vulgaris
Phvul.003G136400 2.0kb upstream 2.0kb upstream 5916 true Chr03: 33412755-33418670 Phaseolus vulgaris
Phvul.003G136400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33412755-33414754 Phaseolus vulgaris
Phvul.003G136400 2.0kb downstream 2.0kb downstream 5916 true Chr03: 33414755-33420670 Phaseolus vulgaris
Phvul.003G136400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33418671-33420670 Phaseolus vulgaris
Phvul.003G136400 5.0kb upstream 5.0kb upstream 8916 true Chr03: 33409755-33418670 Phaseolus vulgaris
Phvul.003G136400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33409755-33414754 Phaseolus vulgaris
Phvul.003G136400 5.0kb downstream 5.0kb downstream 8916 true Chr03: 33414755-33423670 Phaseolus vulgaris
Phvul.003G136400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33418671-33423670 Phaseolus vulgaris
Phvul.003G136400 10.0kb upstream 10.0kb upstream 13916 true Chr03: 33404755-33418670 Phaseolus vulgaris
Phvul.003G136400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33404755-33414754 Phaseolus vulgaris
Phvul.003G136400 10.0kb downstream 10.0kb downstream 13916 true Chr03: 33414755-33428670 Phaseolus vulgaris
Phvul.003G136400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33418671-33428670 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314246 5265 Fabidae View MSA
124067261 5270 Rosid View MSA
123742182 5271 Pentapetalae View MSA
122770229 5272 Eudicot View MSA
122051294 5273 Angiosperm View MSA
121312401 5274 Embryophyte View MSA
123349577 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558782 0.0 2.00675    
cufflinks 0.19767 0.0 0.775304 Low  
cufflinks 0.0550638 0.0 0.239994 Low Low
cufflinks 0.25274 0.0 0.976891 Low  
cufflinks 0.284704 0.0 1.09016 Low  
cufflinks 0.717825 0.0 2.51449    
cufflinks 2.77274 0.0 8.33017   High
cufflinks 23.0731 0.0 59.6623   High
cufflinks 0.17595 0.0 0.69631 Low  
cufflinks 0.111847 0.0 0.459499 Low  
cufflinks 0.409216 0.0 1.52087 Low  

0 Strain