Gene : Phvul.003G137000 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  1374
Name:  ? Phvul.003G137000 Secondary Identifier:  ? PAC:37145378
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G137000 0.5kb upstream 0.5kb upstream 6130 true Chr03: 33513592-33519721 Phaseolus vulgaris
Phvul.003G137000 0.5kb upstream 0.5kb upstream 500 false Chr03: 33519222-33519721 Phaseolus vulgaris
Phvul.003G137000 0.5kb downstream 0.5kb downstream 6130 true Chr03: 33513092-33519221 Phaseolus vulgaris
Phvul.003G137000 0.5kb downstream 0.5kb downstream 500 false Chr03: 33513092-33513591 Phaseolus vulgaris
Phvul.003G137000 1.0kb upstream 1.0kb upstream 6630 true Chr03: 33513592-33520221 Phaseolus vulgaris
Phvul.003G137000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33519222-33520221 Phaseolus vulgaris
Phvul.003G137000 1.0kb downstream 1.0kb downstream 6630 true Chr03: 33512592-33519221 Phaseolus vulgaris
Phvul.003G137000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33512592-33513591 Phaseolus vulgaris
Phvul.003G137000 2.0kb upstream 2.0kb upstream 7630 true Chr03: 33513592-33521221 Phaseolus vulgaris
Phvul.003G137000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33519222-33521221 Phaseolus vulgaris
Phvul.003G137000 2.0kb downstream 2.0kb downstream 7630 true Chr03: 33511592-33519221 Phaseolus vulgaris
Phvul.003G137000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33511592-33513591 Phaseolus vulgaris
Phvul.003G137000 5.0kb upstream 5.0kb upstream 10630 true Chr03: 33513592-33524221 Phaseolus vulgaris
Phvul.003G137000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33519222-33524221 Phaseolus vulgaris
Phvul.003G137000 5.0kb downstream 5.0kb downstream 10630 true Chr03: 33508592-33519221 Phaseolus vulgaris
Phvul.003G137000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33508592-33513591 Phaseolus vulgaris
Phvul.003G137000 10.0kb upstream 10.0kb upstream 15630 true Chr03: 33513592-33529221 Phaseolus vulgaris
Phvul.003G137000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33519222-33529221 Phaseolus vulgaris
Phvul.003G137000 10.0kb downstream 10.0kb downstream 15630 true Chr03: 33503592-33519221 Phaseolus vulgaris
Phvul.003G137000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33503592-33513591 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313819 5265 Fabidae View MSA
124070593 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.27497 0.0 11.632    
cufflinks 5.2868 0.0 14.1547    
cufflinks 7.08569 0.0 18.5812   High
cufflinks 1.42157 0.0 4.37301   Low
cufflinks 3.39271 0.0 9.47313    
cufflinks 6.42848 0.0 16.964    
cufflinks 3.74577 0.0 10.3066    
cufflinks 2.48074 0.0 7.06238    
cufflinks 5.52818 0.0 14.7632    
cufflinks 0.875902 0.0 2.82482   Low
cufflinks 5.97284 0.0 15.8956    

0 Strain