Gene : Phvul.003G138330 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  1450
Name:  ? Phvul.003G138330 Secondary Identifier:  ? PAC:37148050
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G138330 0.5kb upstream 0.5kb upstream 3093 true Chr03: 34784056-34787148 Phaseolus vulgaris
Phvul.003G138330 0.5kb upstream 0.5kb upstream 500 false Chr03: 34786649-34787148 Phaseolus vulgaris
Phvul.003G138330 0.5kb downstream 0.5kb downstream 3093 true Chr03: 34783556-34786648 Phaseolus vulgaris
Phvul.003G138330 0.5kb downstream 0.5kb downstream 500 false Chr03: 34783556-34784055 Phaseolus vulgaris
Phvul.003G138330 1.0kb upstream 1.0kb upstream 3593 true Chr03: 34784056-34787648 Phaseolus vulgaris
Phvul.003G138330 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34786649-34787648 Phaseolus vulgaris
Phvul.003G138330 1.0kb downstream 1.0kb downstream 3593 true Chr03: 34783056-34786648 Phaseolus vulgaris
Phvul.003G138330 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34783056-34784055 Phaseolus vulgaris
Phvul.003G138330 2.0kb upstream 2.0kb upstream 4593 true Chr03: 34784056-34788648 Phaseolus vulgaris
Phvul.003G138330 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34786649-34788648 Phaseolus vulgaris
Phvul.003G138330 2.0kb downstream 2.0kb downstream 4593 true Chr03: 34782056-34786648 Phaseolus vulgaris
Phvul.003G138330 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34782056-34784055 Phaseolus vulgaris
Phvul.003G138330 5.0kb upstream 5.0kb upstream 7593 true Chr03: 34784056-34791648 Phaseolus vulgaris
Phvul.003G138330 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34786649-34791648 Phaseolus vulgaris
Phvul.003G138330 5.0kb downstream 5.0kb downstream 7593 true Chr03: 34779056-34786648 Phaseolus vulgaris
Phvul.003G138330 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34779056-34784055 Phaseolus vulgaris
Phvul.003G138330 10.0kb upstream 10.0kb upstream 12593 true Chr03: 34784056-34796648 Phaseolus vulgaris
Phvul.003G138330 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34786649-34796648 Phaseolus vulgaris
Phvul.003G138330 10.0kb downstream 10.0kb downstream 12593 true Chr03: 34774056-34786648 Phaseolus vulgaris
Phvul.003G138330 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34774056-34784055 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305422 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.582 0.0 333.791 High  
cufflinks 13.3038 0.0 35.7385    
cufflinks 165.615 0.0 478.568 High  
cufflinks 11.1642 0.0 30.5834    
cufflinks 231.883 0.0 696.55 High High
cufflinks 63.8255 0.0 168.31 High  
cufflinks 42.088 0.0 109.14 High  
cufflinks 18.9953 0.0 49.7522    
cufflinks 132.334 0.0 374.07 High  
cufflinks 1.05998 0.0 3.73487   Low
cufflinks 189.879 0.0 557.436 High  

0 Strain