Gene : Phvul.003G125000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13683:SF296 - ASPARTYL PROTEASE FAMILY PROTEIN Genomic Order:  1258
Name:  ? Phvul.003G125000 Secondary Identifier:  ? PAC:37145064
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G125000 0.5kb upstream 0.5kb upstream 4330 true Chr03: 31151946-31156275 Phaseolus vulgaris
Phvul.003G125000 0.5kb upstream 0.5kb upstream 500 false Chr03: 31151946-31152445 Phaseolus vulgaris
Phvul.003G125000 0.5kb downstream 0.5kb downstream 4330 true Chr03: 31152446-31156775 Phaseolus vulgaris
Phvul.003G125000 0.5kb downstream 0.5kb downstream 500 false Chr03: 31156276-31156775 Phaseolus vulgaris
Phvul.003G125000 1.0kb upstream 1.0kb upstream 4830 true Chr03: 31151446-31156275 Phaseolus vulgaris
Phvul.003G125000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31151446-31152445 Phaseolus vulgaris
Phvul.003G125000 1.0kb downstream 1.0kb downstream 4830 true Chr03: 31152446-31157275 Phaseolus vulgaris
Phvul.003G125000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31156276-31157275 Phaseolus vulgaris
Phvul.003G125000 2.0kb upstream 2.0kb upstream 5830 true Chr03: 31150446-31156275 Phaseolus vulgaris
Phvul.003G125000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31150446-31152445 Phaseolus vulgaris
Phvul.003G125000 2.0kb downstream 2.0kb downstream 5830 true Chr03: 31152446-31158275 Phaseolus vulgaris
Phvul.003G125000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31156276-31158275 Phaseolus vulgaris
Phvul.003G125000 5.0kb upstream 5.0kb upstream 8830 true Chr03: 31147446-31156275 Phaseolus vulgaris
Phvul.003G125000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31147446-31152445 Phaseolus vulgaris
Phvul.003G125000 5.0kb downstream 5.0kb downstream 8830 true Chr03: 31152446-31161275 Phaseolus vulgaris
Phvul.003G125000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31156276-31161275 Phaseolus vulgaris
Phvul.003G125000 10.0kb upstream 10.0kb upstream 13830 true Chr03: 31142446-31156275 Phaseolus vulgaris
Phvul.003G125000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31142446-31152445 Phaseolus vulgaris
Phvul.003G125000 10.0kb downstream 10.0kb downstream 13830 true Chr03: 31152446-31166275 Phaseolus vulgaris
Phvul.003G125000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31156276-31166275 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780043 5273 Angiosperm View MSA
122311661 5265 Fabidae View MSA
124071121 5270 Rosid View MSA
123744877 5271 Pentapetalae View MSA
122771281 5272 Eudicot View MSA
121051677 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.102015 0.0 0.433191 Low Low
cufflinks 1.81368 0.0 6.4307    
cufflinks 0.665249 0.0 2.96703    
cufflinks 0.244901 0.0 0.971262 Low Low
cufflinks 1.08443 0.0 5.81848    
cufflinks 9.85913 0.0 31.299    
cufflinks 10.771 0.0 33.3625   High
cufflinks 11.3063 0.0 38.6473   High
cufflinks 12.7017 0.0 38.8227   High
cufflinks 1.09801 0.0 5.98212    
cufflinks 3.77758 0.0 14.2932    

0 Strain