Gene : Phvul.003G125400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  1262
Name:  ? Phvul.003G125400 Secondary Identifier:  ? PAC:37146918
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G125400 0.5kb upstream 0.5kb upstream 3488 true Chr03: 31240683-31244170 Phaseolus vulgaris
Phvul.003G125400 0.5kb upstream 0.5kb upstream 500 false Chr03: 31240683-31241182 Phaseolus vulgaris
Phvul.003G125400 0.5kb downstream 0.5kb downstream 3488 true Chr03: 31241183-31244670 Phaseolus vulgaris
Phvul.003G125400 0.5kb downstream 0.5kb downstream 500 false Chr03: 31244171-31244670 Phaseolus vulgaris
Phvul.003G125400 1.0kb upstream 1.0kb upstream 3988 true Chr03: 31240183-31244170 Phaseolus vulgaris
Phvul.003G125400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31240183-31241182 Phaseolus vulgaris
Phvul.003G125400 1.0kb downstream 1.0kb downstream 3988 true Chr03: 31241183-31245170 Phaseolus vulgaris
Phvul.003G125400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31244171-31245170 Phaseolus vulgaris
Phvul.003G125400 2.0kb upstream 2.0kb upstream 4988 true Chr03: 31239183-31244170 Phaseolus vulgaris
Phvul.003G125400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31239183-31241182 Phaseolus vulgaris
Phvul.003G125400 2.0kb downstream 2.0kb downstream 4988 true Chr03: 31241183-31246170 Phaseolus vulgaris
Phvul.003G125400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31244171-31246170 Phaseolus vulgaris
Phvul.003G125400 5.0kb upstream 5.0kb upstream 7988 true Chr03: 31236183-31244170 Phaseolus vulgaris
Phvul.003G125400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31236183-31241182 Phaseolus vulgaris
Phvul.003G125400 5.0kb downstream 5.0kb downstream 7988 true Chr03: 31241183-31249170 Phaseolus vulgaris
Phvul.003G125400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31244171-31249170 Phaseolus vulgaris
Phvul.003G125400 10.0kb upstream 10.0kb upstream 12988 true Chr03: 31231183-31244170 Phaseolus vulgaris
Phvul.003G125400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31231183-31241182 Phaseolus vulgaris
Phvul.003G125400 10.0kb downstream 10.0kb downstream 12988 true Chr03: 31241183-31254170 Phaseolus vulgaris
Phvul.003G125400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31244171-31254170 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305664 5265 Fabidae View MSA
124067619 5270 Rosid View MSA
123736820 5271 Pentapetalae View MSA
122786957 5272 Eudicot View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.4474 0.0 146.376 High Low
cufflinks 92.0007 0.0 243.884 High  
cufflinks 53.024 0.0 137.184 High Low
cufflinks 109.93 0.0 294.659 High High
cufflinks 97.5127 0.0 259.868 High  
cufflinks 54.952 0.0 142.309 High Low
cufflinks 61.7215 0.0 160.444 High  
cufflinks 82.1158 0.0 216.187 High  
cufflinks 93.4226 0.0 247.892 High  
cufflinks 91.1573 0.0 242.317 High  
cufflinks 91.6123 0.0 243.381 High  

0 Strain