Gene : Phvul.003G125600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13343:SF17 - CELLULAR REPRESSOR OF E1A-STIMULATED GENES, ISOFORM A Genomic Order:  1264
Name:  ? Phvul.003G125600 Secondary Identifier:  ? PAC:37147027
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G125600 0.5kb upstream 0.5kb upstream 3293 true Chr03: 31254525-31257817 Phaseolus vulgaris
Phvul.003G125600 0.5kb upstream 0.5kb upstream 500 false Chr03: 31254525-31255024 Phaseolus vulgaris
Phvul.003G125600 0.5kb downstream 0.5kb downstream 3293 true Chr03: 31255025-31258317 Phaseolus vulgaris
Phvul.003G125600 0.5kb downstream 0.5kb downstream 500 false Chr03: 31257818-31258317 Phaseolus vulgaris
Phvul.003G125600 1.0kb upstream 1.0kb upstream 3793 true Chr03: 31254025-31257817 Phaseolus vulgaris
Phvul.003G125600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31254025-31255024 Phaseolus vulgaris
Phvul.003G125600 1.0kb downstream 1.0kb downstream 3793 true Chr03: 31255025-31258817 Phaseolus vulgaris
Phvul.003G125600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31257818-31258817 Phaseolus vulgaris
Phvul.003G125600 2.0kb upstream 2.0kb upstream 4793 true Chr03: 31253025-31257817 Phaseolus vulgaris
Phvul.003G125600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31253025-31255024 Phaseolus vulgaris
Phvul.003G125600 2.0kb downstream 2.0kb downstream 4793 true Chr03: 31255025-31259817 Phaseolus vulgaris
Phvul.003G125600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31257818-31259817 Phaseolus vulgaris
Phvul.003G125600 5.0kb upstream 5.0kb upstream 7793 true Chr03: 31250025-31257817 Phaseolus vulgaris
Phvul.003G125600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31250025-31255024 Phaseolus vulgaris
Phvul.003G125600 5.0kb downstream 5.0kb downstream 7793 true Chr03: 31255025-31262817 Phaseolus vulgaris
Phvul.003G125600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31257818-31262817 Phaseolus vulgaris
Phvul.003G125600 10.0kb upstream 10.0kb upstream 12793 true Chr03: 31245025-31257817 Phaseolus vulgaris
Phvul.003G125600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31245025-31255024 Phaseolus vulgaris
Phvul.003G125600 10.0kb downstream 10.0kb downstream 12793 true Chr03: 31255025-31267817 Phaseolus vulgaris
Phvul.003G125600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31257818-31267817 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304704 5265 Fabidae View MSA
124060468 5270 Rosid View MSA
123752087 5271 Pentapetalae View MSA
122795497 5272 Eudicot View MSA
122043894 5273 Angiosperm View MSA
121347354 5274 Embryophyte View MSA
123424042 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3472 0.0 57.9966   High
cufflinks 6.46234 0.0 25.2711   Low
cufflinks 11.8851 0.0 40.4028    
cufflinks 10.0312 0.0 35.7577    
cufflinks 14.0024 0.0 50.0873    
cufflinks 6.50423 0.0 25.1955   Low
cufflinks 9.7852 0.0 33.7813    
cufflinks 13.0189 0.0 41.713    
cufflinks 20.2008 0.0 60.4618   High
cufflinks 12.3058 0.0 43.7962    
cufflinks 8.7982 0.0 31.1274    

0 Strain