Gene : Phvul.003G128400 P. vulgaris v2.1
Genomic Order:  1291 Name:  ? Phvul.003G128400
Secondary Identifier:  ? PAC:37145191
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G128400 0.5kb upstream 0.5kb upstream 1378 true Chr03: 32072417-32073794 Phaseolus vulgaris
Phvul.003G128400 0.5kb upstream 0.5kb upstream 500 false Chr03: 32072417-32072916 Phaseolus vulgaris
Phvul.003G128400 0.5kb downstream 0.5kb downstream 1378 true Chr03: 32072917-32074294 Phaseolus vulgaris
Phvul.003G128400 0.5kb downstream 0.5kb downstream 500 false Chr03: 32073795-32074294 Phaseolus vulgaris
Phvul.003G128400 1.0kb upstream 1.0kb upstream 1878 true Chr03: 32071917-32073794 Phaseolus vulgaris
Phvul.003G128400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32071917-32072916 Phaseolus vulgaris
Phvul.003G128400 1.0kb downstream 1.0kb downstream 1878 true Chr03: 32072917-32074794 Phaseolus vulgaris
Phvul.003G128400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32073795-32074794 Phaseolus vulgaris
Phvul.003G128400 2.0kb upstream 2.0kb upstream 2878 true Chr03: 32070917-32073794 Phaseolus vulgaris
Phvul.003G128400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32070917-32072916 Phaseolus vulgaris
Phvul.003G128400 2.0kb downstream 2.0kb downstream 2878 true Chr03: 32072917-32075794 Phaseolus vulgaris
Phvul.003G128400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32073795-32075794 Phaseolus vulgaris
Phvul.003G128400 5.0kb upstream 5.0kb upstream 5878 true Chr03: 32067917-32073794 Phaseolus vulgaris
Phvul.003G128400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32067917-32072916 Phaseolus vulgaris
Phvul.003G128400 5.0kb downstream 5.0kb downstream 5878 true Chr03: 32072917-32078794 Phaseolus vulgaris
Phvul.003G128400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32073795-32078794 Phaseolus vulgaris
Phvul.003G128400 10.0kb upstream 10.0kb upstream 10878 true Chr03: 32062917-32073794 Phaseolus vulgaris
Phvul.003G128400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32062917-32072916 Phaseolus vulgaris
Phvul.003G128400 10.0kb downstream 10.0kb downstream 10878 true Chr03: 32072917-32083794 Phaseolus vulgaris
Phvul.003G128400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32073795-32083794 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297762 5265 Fabidae View MSA
124065995 5270 Rosid View MSA
123741901 5271 Pentapetalae View MSA
122793758 5272 Eudicot View MSA
122045771 5273 Angiosperm View MSA
121310499 5274 Embryophyte View MSA
123347967 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30575 0.0 4.58461    
cufflinks 0.728182 0.0 2.71078    
cufflinks 0.765417 0.0 2.83958    
cufflinks 0.632578 0.0 2.38377    
cufflinks 1.99085 0.0 6.68484    
cufflinks 1.22803 0.0 4.35547    
cufflinks 3.53973 0.0 11.0594    
cufflinks 5.54713 0.0 16.588    
cufflinks 4.68458 0.0 14.2227    
cufflinks 0.0660623 0.0 0.302952 Low Low
cufflinks 9.61442 0.0 27.033   High

0 Strain