Gene : Phvul.003G128800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Genomic Order:  1295
Name:  ? Phvul.003G128800 Secondary Identifier:  ? PAC:37147994
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G128800 0.5kb upstream 0.5kb upstream 8289 true Chr03: 32230127-32238415 Phaseolus vulgaris
Phvul.003G128800 0.5kb upstream 0.5kb upstream 500 false Chr03: 32230127-32230626 Phaseolus vulgaris
Phvul.003G128800 0.5kb downstream 0.5kb downstream 8289 true Chr03: 32230627-32238915 Phaseolus vulgaris
Phvul.003G128800 0.5kb downstream 0.5kb downstream 500 false Chr03: 32238416-32238915 Phaseolus vulgaris
Phvul.003G128800 1.0kb upstream 1.0kb upstream 8789 true Chr03: 32229627-32238415 Phaseolus vulgaris
Phvul.003G128800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32229627-32230626 Phaseolus vulgaris
Phvul.003G128800 1.0kb downstream 1.0kb downstream 8789 true Chr03: 32230627-32239415 Phaseolus vulgaris
Phvul.003G128800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32238416-32239415 Phaseolus vulgaris
Phvul.003G128800 2.0kb upstream 2.0kb upstream 9789 true Chr03: 32228627-32238415 Phaseolus vulgaris
Phvul.003G128800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32228627-32230626 Phaseolus vulgaris
Phvul.003G128800 2.0kb downstream 2.0kb downstream 9789 true Chr03: 32230627-32240415 Phaseolus vulgaris
Phvul.003G128800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32238416-32240415 Phaseolus vulgaris
Phvul.003G128800 5.0kb upstream 5.0kb upstream 12789 true Chr03: 32225627-32238415 Phaseolus vulgaris
Phvul.003G128800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32225627-32230626 Phaseolus vulgaris
Phvul.003G128800 5.0kb downstream 5.0kb downstream 12789 true Chr03: 32230627-32243415 Phaseolus vulgaris
Phvul.003G128800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32238416-32243415 Phaseolus vulgaris
Phvul.003G128800 10.0kb upstream 10.0kb upstream 17789 true Chr03: 32220627-32238415 Phaseolus vulgaris
Phvul.003G128800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32220627-32230626 Phaseolus vulgaris
Phvul.003G128800 10.0kb downstream 10.0kb downstream 17789 true Chr03: 32230627-32248415 Phaseolus vulgaris
Phvul.003G128800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32238416-32248415 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314345 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.01422 0.0 10.7344   Low
cufflinks 7.00646 0.0 18.1891    
cufflinks 9.72671 0.0 25.1444    
cufflinks 2.99318 0.0 8.21481   Low
cufflinks 34.848 0.0 96.7757 High High
cufflinks 10.56 0.0 27.3066    
cufflinks 9.39373 0.0 24.2813    
cufflinks 7.8636 0.0 20.3516    
cufflinks 6.58543 0.0 17.123    
cufflinks 15.4543 0.0 40.3478    
cufflinks 28.9327 0.0 78.7532   High

0 Strain