Gene : Phvul.003G128900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10772:SF0 - 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  1296
Name:  ? Phvul.003G128900 Secondary Identifier:  ? PAC:37147706
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G128900 0.5kb upstream 0.5kb upstream 3040 true Chr03: 32239076-32242115 Phaseolus vulgaris
Phvul.003G128900 0.5kb upstream 0.5kb upstream 500 false Chr03: 32241616-32242115 Phaseolus vulgaris
Phvul.003G128900 0.5kb downstream 0.5kb downstream 3040 true Chr03: 32238576-32241615 Phaseolus vulgaris
Phvul.003G128900 0.5kb downstream 0.5kb downstream 500 false Chr03: 32238576-32239075 Phaseolus vulgaris
Phvul.003G128900 1.0kb upstream 1.0kb upstream 3540 true Chr03: 32239076-32242615 Phaseolus vulgaris
Phvul.003G128900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32241616-32242615 Phaseolus vulgaris
Phvul.003G128900 1.0kb downstream 1.0kb downstream 3540 true Chr03: 32238076-32241615 Phaseolus vulgaris
Phvul.003G128900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32238076-32239075 Phaseolus vulgaris
Phvul.003G128900 2.0kb upstream 2.0kb upstream 4540 true Chr03: 32239076-32243615 Phaseolus vulgaris
Phvul.003G128900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32241616-32243615 Phaseolus vulgaris
Phvul.003G128900 2.0kb downstream 2.0kb downstream 4540 true Chr03: 32237076-32241615 Phaseolus vulgaris
Phvul.003G128900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32237076-32239075 Phaseolus vulgaris
Phvul.003G128900 5.0kb upstream 5.0kb upstream 7540 true Chr03: 32239076-32246615 Phaseolus vulgaris
Phvul.003G128900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32241616-32246615 Phaseolus vulgaris
Phvul.003G128900 5.0kb downstream 5.0kb downstream 7540 true Chr03: 32234076-32241615 Phaseolus vulgaris
Phvul.003G128900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32234076-32239075 Phaseolus vulgaris
Phvul.003G128900 10.0kb upstream 10.0kb upstream 12540 true Chr03: 32239076-32251615 Phaseolus vulgaris
Phvul.003G128900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32241616-32251615 Phaseolus vulgaris
Phvul.003G128900 10.0kb downstream 10.0kb downstream 12540 true Chr03: 32229076-32241615 Phaseolus vulgaris
Phvul.003G128900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32229076-32239075 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297530 5265 Fabidae View MSA
124064772 5270 Rosid View MSA
123741725 5271 Pentapetalae View MSA
122790070 5272 Eudicot View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.851 0.0 22.132    
cufflinks 25.2055 0.0 65.4607    
cufflinks 57.1071 0.0 149.44 High High
cufflinks 18.0406 0.0 47.7738    
cufflinks 12.6288 0.0 34.3378    
cufflinks 63.9464 0.0 168.325 High High
cufflinks 4.45637 0.0 13.3883    
cufflinks 5.55132 0.0 16.2318    
cufflinks 6.5112 0.0 18.7732    
cufflinks 1.366 0.0 4.70232   Low
cufflinks 11.6388 0.0 31.8803    

0 Strain