Gene : Phvul.003G129100 P. vulgaris v2.1
Defline:  (1 of 3) K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Genomic Order:  1298
Name:  ? Phvul.003G129100 Secondary Identifier:  ? PAC:37148112
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G129100 0.5kb upstream 0.5kb upstream 5014 true Chr03: 32298000-32303013 Phaseolus vulgaris
Phvul.003G129100 0.5kb upstream 0.5kb upstream 500 false Chr03: 32302514-32303013 Phaseolus vulgaris
Phvul.003G129100 0.5kb downstream 0.5kb downstream 5014 true Chr03: 32297500-32302513 Phaseolus vulgaris
Phvul.003G129100 0.5kb downstream 0.5kb downstream 500 false Chr03: 32297500-32297999 Phaseolus vulgaris
Phvul.003G129100 1.0kb upstream 1.0kb upstream 5514 true Chr03: 32298000-32303513 Phaseolus vulgaris
Phvul.003G129100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32302514-32303513 Phaseolus vulgaris
Phvul.003G129100 1.0kb downstream 1.0kb downstream 5514 true Chr03: 32297000-32302513 Phaseolus vulgaris
Phvul.003G129100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32297000-32297999 Phaseolus vulgaris
Phvul.003G129100 2.0kb upstream 2.0kb upstream 6514 true Chr03: 32298000-32304513 Phaseolus vulgaris
Phvul.003G129100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32302514-32304513 Phaseolus vulgaris
Phvul.003G129100 2.0kb downstream 2.0kb downstream 6514 true Chr03: 32296000-32302513 Phaseolus vulgaris
Phvul.003G129100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32296000-32297999 Phaseolus vulgaris
Phvul.003G129100 5.0kb upstream 5.0kb upstream 9514 true Chr03: 32298000-32307513 Phaseolus vulgaris
Phvul.003G129100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32302514-32307513 Phaseolus vulgaris
Phvul.003G129100 5.0kb downstream 5.0kb downstream 9514 true Chr03: 32293000-32302513 Phaseolus vulgaris
Phvul.003G129100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32293000-32297999 Phaseolus vulgaris
Phvul.003G129100 10.0kb upstream 10.0kb upstream 14514 true Chr03: 32298000-32312513 Phaseolus vulgaris
Phvul.003G129100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32302514-32312513 Phaseolus vulgaris
Phvul.003G129100 10.0kb downstream 10.0kb downstream 14514 true Chr03: 32288000-32302513 Phaseolus vulgaris
Phvul.003G129100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32288000-32297999 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301916 5265 Fabidae View MSA
124072595 5270 Rosid View MSA
123752165 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.2758 0.0 239.496 High  
cufflinks 85.0158 0.0 232.241 High  
cufflinks 76.1241 0.0 205.98 High  
cufflinks 82.4085 0.0 223.808 High  
cufflinks 101.047 0.0 279.943 High High
cufflinks 59.9514 0.0 159.055 High Low
cufflinks 58.751 0.0 155.829 High Low
cufflinks 51.6422 0.0 135.933 High Low
cufflinks 70.0237 0.0 187.974 High  
cufflinks 114.275 0.0 321.532 High High
cufflinks 86.7244 0.0 236.623 High  

0 Strain