Gene : Phvul.003G132200 P. vulgaris v2.1
Defline:  (1 of 7) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  1328
Name:  ? Phvul.003G132200 Secondary Identifier:  ? PAC:37147990
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G132200 0.5kb upstream 0.5kb upstream 1667 true Chr03: 32867668-32869334 Phaseolus vulgaris
Phvul.003G132200 0.5kb upstream 0.5kb upstream 500 false Chr03: 32868835-32869334 Phaseolus vulgaris
Phvul.003G132200 0.5kb downstream 0.5kb downstream 1667 true Chr03: 32867168-32868834 Phaseolus vulgaris
Phvul.003G132200 0.5kb downstream 0.5kb downstream 500 false Chr03: 32867168-32867667 Phaseolus vulgaris
Phvul.003G132200 1.0kb upstream 1.0kb upstream 2167 true Chr03: 32867668-32869834 Phaseolus vulgaris
Phvul.003G132200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 32868835-32869834 Phaseolus vulgaris
Phvul.003G132200 1.0kb downstream 1.0kb downstream 2167 true Chr03: 32866668-32868834 Phaseolus vulgaris
Phvul.003G132200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 32866668-32867667 Phaseolus vulgaris
Phvul.003G132200 2.0kb upstream 2.0kb upstream 3167 true Chr03: 32867668-32870834 Phaseolus vulgaris
Phvul.003G132200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 32868835-32870834 Phaseolus vulgaris
Phvul.003G132200 2.0kb downstream 2.0kb downstream 3167 true Chr03: 32865668-32868834 Phaseolus vulgaris
Phvul.003G132200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 32865668-32867667 Phaseolus vulgaris
Phvul.003G132200 5.0kb upstream 5.0kb upstream 6167 true Chr03: 32867668-32873834 Phaseolus vulgaris
Phvul.003G132200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 32868835-32873834 Phaseolus vulgaris
Phvul.003G132200 5.0kb downstream 5.0kb downstream 6167 true Chr03: 32862668-32868834 Phaseolus vulgaris
Phvul.003G132200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 32862668-32867667 Phaseolus vulgaris
Phvul.003G132200 10.0kb upstream 10.0kb upstream 11167 true Chr03: 32867668-32878834 Phaseolus vulgaris
Phvul.003G132200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 32868835-32878834 Phaseolus vulgaris
Phvul.003G132200 10.0kb downstream 10.0kb downstream 11167 true Chr03: 32857668-32868834 Phaseolus vulgaris
Phvul.003G132200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 32857668-32867667 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302953 5265 Fabidae View MSA
124064751 5270 Rosid View MSA
123737427 5271 Pentapetalae View MSA
122789103 5272 Eudicot View MSA
122048000 5273 Angiosperm View MSA
121347460 5274 Embryophyte View MSA
123380557 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.671 0.0 126.193 High  
cufflinks 63.4104 0.0 166.043 High  
cufflinks 125.557 0.0 345.964 High High
cufflinks 99.437 0.0 269.508 High High
cufflinks 78.6371 0.0 209.111 High  
cufflinks 70.7987 0.0 186.491 High  
cufflinks 35.4341 0.0 91.5907 High Low
cufflinks 40.7629 0.0 105.393 High  
cufflinks 49.9819 0.0 129.818 High  
cufflinks 34.8442 0.0 90.0783   Low
cufflinks 93.5565 0.0 252.816 High  

0 Strain