Gene : Phvul.003G119700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24115:SF417 - PHRAGMOPLAST ORIENTING KINESIN-1 Genomic Order:  1203
Name:  ? Phvul.003G119700 Secondary Identifier:  ? PAC:37146237
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G119700 0.5kb upstream 0.5kb upstream 12945 true Chr03: 30436383-30449327 Phaseolus vulgaris
Phvul.003G119700 0.5kb upstream 0.5kb upstream 500 false Chr03: 30436383-30436882 Phaseolus vulgaris
Phvul.003G119700 0.5kb downstream 0.5kb downstream 12945 true Chr03: 30436883-30449827 Phaseolus vulgaris
Phvul.003G119700 0.5kb downstream 0.5kb downstream 500 false Chr03: 30449328-30449827 Phaseolus vulgaris
Phvul.003G119700 1.0kb upstream 1.0kb upstream 13445 true Chr03: 30435883-30449327 Phaseolus vulgaris
Phvul.003G119700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30435883-30436882 Phaseolus vulgaris
Phvul.003G119700 1.0kb downstream 1.0kb downstream 13445 true Chr03: 30436883-30450327 Phaseolus vulgaris
Phvul.003G119700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30449328-30450327 Phaseolus vulgaris
Phvul.003G119700 2.0kb upstream 2.0kb upstream 14445 true Chr03: 30434883-30449327 Phaseolus vulgaris
Phvul.003G119700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30434883-30436882 Phaseolus vulgaris
Phvul.003G119700 2.0kb downstream 2.0kb downstream 14445 true Chr03: 30436883-30451327 Phaseolus vulgaris
Phvul.003G119700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30449328-30451327 Phaseolus vulgaris
Phvul.003G119700 5.0kb upstream 5.0kb upstream 17445 true Chr03: 30431883-30449327 Phaseolus vulgaris
Phvul.003G119700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30431883-30436882 Phaseolus vulgaris
Phvul.003G119700 5.0kb downstream 5.0kb downstream 17445 true Chr03: 30436883-30454327 Phaseolus vulgaris
Phvul.003G119700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30449328-30454327 Phaseolus vulgaris
Phvul.003G119700 10.0kb upstream 10.0kb upstream 22445 true Chr03: 30426883-30449327 Phaseolus vulgaris
Phvul.003G119700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30426883-30436882 Phaseolus vulgaris
Phvul.003G119700 10.0kb downstream 10.0kb downstream 22445 true Chr03: 30436883-30459327 Phaseolus vulgaris
Phvul.003G119700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30449328-30459327 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301860 5265 Fabidae View MSA
124060922 5270 Rosid View MSA
123749768 5271 Pentapetalae View MSA
122792500 5272 Eudicot View MSA
122048551 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350480 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.143371 0.0 0.647971 Low Low
cufflinks 1.2247 0.0 4.19008    
cufflinks 0.866204 0.0 3.18444    
cufflinks 0.189382 0.0 1.11232 Low Low
cufflinks 1.17135 0.0 4.85273    
cufflinks 2.73751 0.0 8.2123    
cufflinks 3.91851 0.0 12.7123   High
cufflinks 2.98817 0.0 8.64951    
cufflinks 2.72876 0.0 9.27256    
cufflinks 0.199136 0.0 1.1024 Low Low
cufflinks 0.739861 0.0 2.95801    

0 Strain