Gene : Phvul.003G120300 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11964:SF16 - S-ADENOSYLMETHIONINE SYNTHASE 4 Genomic Order:  1209
Name:  ? Phvul.003G120300 Secondary Identifier:  ? PAC:37145744
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5041 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7528 Phaseolus vulgaris pathologic  
Pvulgaris SAM-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G120300 0.5kb upstream 0.5kb upstream 2986 true Chr03: 30494776-30497761 Phaseolus vulgaris
Phvul.003G120300 0.5kb upstream 0.5kb upstream 500 false Chr03: 30494776-30495275 Phaseolus vulgaris
Phvul.003G120300 0.5kb downstream 0.5kb downstream 2986 true Chr03: 30495276-30498261 Phaseolus vulgaris
Phvul.003G120300 0.5kb downstream 0.5kb downstream 500 false Chr03: 30497762-30498261 Phaseolus vulgaris
Phvul.003G120300 1.0kb upstream 1.0kb upstream 3486 true Chr03: 30494276-30497761 Phaseolus vulgaris
Phvul.003G120300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30494276-30495275 Phaseolus vulgaris
Phvul.003G120300 1.0kb downstream 1.0kb downstream 3486 true Chr03: 30495276-30498761 Phaseolus vulgaris
Phvul.003G120300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30497762-30498761 Phaseolus vulgaris
Phvul.003G120300 2.0kb upstream 2.0kb upstream 4486 true Chr03: 30493276-30497761 Phaseolus vulgaris
Phvul.003G120300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30493276-30495275 Phaseolus vulgaris
Phvul.003G120300 2.0kb downstream 2.0kb downstream 4486 true Chr03: 30495276-30499761 Phaseolus vulgaris
Phvul.003G120300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30497762-30499761 Phaseolus vulgaris
Phvul.003G120300 5.0kb upstream 5.0kb upstream 7486 true Chr03: 30490276-30497761 Phaseolus vulgaris
Phvul.003G120300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30490276-30495275 Phaseolus vulgaris
Phvul.003G120300 5.0kb downstream 5.0kb downstream 7486 true Chr03: 30495276-30502761 Phaseolus vulgaris
Phvul.003G120300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30497762-30502761 Phaseolus vulgaris
Phvul.003G120300 10.0kb upstream 10.0kb upstream 12486 true Chr03: 30485276-30497761 Phaseolus vulgaris
Phvul.003G120300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30485276-30495275 Phaseolus vulgaris
Phvul.003G120300 10.0kb downstream 10.0kb downstream 12486 true Chr03: 30495276-30507761 Phaseolus vulgaris
Phvul.003G120300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30497762-30507761 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312282 5265 Fabidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.596 0.0 269.562 High  
cufflinks 104.009 0.0 351.094 High  
cufflinks 43.8377 0.0 125.272 High Low
cufflinks 141.806 0.0 521.798 High  
cufflinks 490.157 0.0 2354.11 High High
cufflinks 86.9681 0.0 322.919 High  
cufflinks 135.912 0.0 498.245 High  
cufflinks 52.5058 0.0 177.86 High Low
cufflinks 150.356 0.0 569.233 High  
cufflinks 486.298 0.0 2290.94 High High
cufflinks 679.701 0.0 2785.27 High High

0 Strain