Gene : Phvul.003G120201 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11964:SF16 - S-ADENOSYLMETHIONINE SYNTHASE 4 Genomic Order:  1208
Name:  ? Phvul.003G120201 Secondary Identifier:  ? PAC:37145672
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5041 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7528 Phaseolus vulgaris pathologic  
Pvulgaris SAM-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G120201 0.5kb upstream 0.5kb upstream 2674 true Chr03: 30490037-30492710 Phaseolus vulgaris
Phvul.003G120201 0.5kb upstream 0.5kb upstream 500 false Chr03: 30490037-30490536 Phaseolus vulgaris
Phvul.003G120201 0.5kb downstream 0.5kb downstream 2674 true Chr03: 30490537-30493210 Phaseolus vulgaris
Phvul.003G120201 0.5kb downstream 0.5kb downstream 500 false Chr03: 30492711-30493210 Phaseolus vulgaris
Phvul.003G120201 1.0kb upstream 1.0kb upstream 3174 true Chr03: 30489537-30492710 Phaseolus vulgaris
Phvul.003G120201 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30489537-30490536 Phaseolus vulgaris
Phvul.003G120201 1.0kb downstream 1.0kb downstream 3174 true Chr03: 30490537-30493710 Phaseolus vulgaris
Phvul.003G120201 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30492711-30493710 Phaseolus vulgaris
Phvul.003G120201 2.0kb upstream 2.0kb upstream 4174 true Chr03: 30488537-30492710 Phaseolus vulgaris
Phvul.003G120201 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30488537-30490536 Phaseolus vulgaris
Phvul.003G120201 2.0kb downstream 2.0kb downstream 4174 true Chr03: 30490537-30494710 Phaseolus vulgaris
Phvul.003G120201 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30492711-30494710 Phaseolus vulgaris
Phvul.003G120201 5.0kb upstream 5.0kb upstream 7174 true Chr03: 30485537-30492710 Phaseolus vulgaris
Phvul.003G120201 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30485537-30490536 Phaseolus vulgaris
Phvul.003G120201 5.0kb downstream 5.0kb downstream 7174 true Chr03: 30490537-30497710 Phaseolus vulgaris
Phvul.003G120201 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30492711-30497710 Phaseolus vulgaris
Phvul.003G120201 10.0kb upstream 10.0kb upstream 12174 true Chr03: 30480537-30492710 Phaseolus vulgaris
Phvul.003G120201 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30480537-30490536 Phaseolus vulgaris
Phvul.003G120201 10.0kb downstream 10.0kb downstream 12174 true Chr03: 30490537-30502710 Phaseolus vulgaris
Phvul.003G120201 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30492711-30502710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312282 5265 Fabidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 154.442 0.0 460.029 High Low
cufflinks 365.017 0.0 1276.72 High  
cufflinks 226.158 0.0 715.432 High  
cufflinks 639.067 0.0 2579.75 High  
cufflinks 1047.05 0.0 4853.77 High High
cufflinks 301.878 0.0 1013.24 High  
cufflinks 229.372 0.0 734.883 High  
cufflinks 128.516 0.0 372.746 High Low
cufflinks 224.963 0.0 719.414 High  
cufflinks 589.318 0.0 2324.57 High  
cufflinks 1057.17 0.0 4901.42 High High

0 Strain