Gene : Phvul.003G112300 P. vulgaris v2.1
Defline:  (1 of 3) 1.8.1.4 - Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Genomic Order:  1129
Name:  ? Phvul.003G112300 Secondary Identifier:  ? PAC:37147512
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLYCLEAV-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5046 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5084 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5173 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PYRUVDEHYD-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G112300 0.5kb upstream 0.5kb upstream 7922 true Chr03: 28749381-28757302 Phaseolus vulgaris
Phvul.003G112300 0.5kb upstream 0.5kb upstream 500 false Chr03: 28756803-28757302 Phaseolus vulgaris
Phvul.003G112300 0.5kb downstream 0.5kb downstream 7922 true Chr03: 28748881-28756802 Phaseolus vulgaris
Phvul.003G112300 0.5kb downstream 0.5kb downstream 500 false Chr03: 28748881-28749380 Phaseolus vulgaris
Phvul.003G112300 1.0kb upstream 1.0kb upstream 8422 true Chr03: 28749381-28757802 Phaseolus vulgaris
Phvul.003G112300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28756803-28757802 Phaseolus vulgaris
Phvul.003G112300 1.0kb downstream 1.0kb downstream 8422 true Chr03: 28748381-28756802 Phaseolus vulgaris
Phvul.003G112300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28748381-28749380 Phaseolus vulgaris
Phvul.003G112300 2.0kb upstream 2.0kb upstream 9422 true Chr03: 28749381-28758802 Phaseolus vulgaris
Phvul.003G112300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28756803-28758802 Phaseolus vulgaris
Phvul.003G112300 2.0kb downstream 2.0kb downstream 9422 true Chr03: 28747381-28756802 Phaseolus vulgaris
Phvul.003G112300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28747381-28749380 Phaseolus vulgaris
Phvul.003G112300 5.0kb upstream 5.0kb upstream 12422 true Chr03: 28749381-28761802 Phaseolus vulgaris
Phvul.003G112300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28756803-28761802 Phaseolus vulgaris
Phvul.003G112300 5.0kb downstream 5.0kb downstream 12422 true Chr03: 28744381-28756802 Phaseolus vulgaris
Phvul.003G112300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28744381-28749380 Phaseolus vulgaris
Phvul.003G112300 10.0kb upstream 10.0kb upstream 17422 true Chr03: 28749381-28766802 Phaseolus vulgaris
Phvul.003G112300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28756803-28766802 Phaseolus vulgaris
Phvul.003G112300 10.0kb downstream 10.0kb downstream 17422 true Chr03: 28739381-28756802 Phaseolus vulgaris
Phvul.003G112300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28739381-28749380 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
122307592 5265 Fabidae View MSA
124065612 5270 Rosid View MSA
123745310 5271 Pentapetalae View MSA
122789628 5272 Eudicot View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.58372 0.0 22.7672   Low
cufflinks 21.4013 0.0 55.3745    
cufflinks 23.6649 0.0 61.3579    
cufflinks 28.5947 0.0 74.4793   High
cufflinks 15.5604 0.0 40.2993    
cufflinks 27.0435 0.0 70.3907   High
cufflinks 14.6099 0.0 37.835    
cufflinks 15.0867 0.0 39.0401    
cufflinks 22.5084 0.0 58.2862    
cufflinks 8.31761 0.0 22.1451   Low
cufflinks 19.3379 0.0 49.9859    

0 Strain