Gene : Phvul.003G111801 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10804:SF68 - METHIONINE AMINOPEPTIDASE 1B, CHLOROPLASTIC Genomic Order:  285
Name:  ? Phvul.003G111801 Secondary Identifier:  ? PAC:37147877
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G111801 0.5kb upstream 0.5kb upstream 21535 true Chr03: 2706183-2727717 Phaseolus vulgaris
Phvul.003G111801 0.5kb upstream 0.5kb upstream 500 false Chr03: 2706183-2706682 Phaseolus vulgaris
Phvul.003G111801 0.5kb downstream 0.5kb downstream 21535 true Chr03: 2706683-2728217 Phaseolus vulgaris
Phvul.003G111801 0.5kb downstream 0.5kb downstream 500 false Chr03: 2727718-2728217 Phaseolus vulgaris
Phvul.003G111801 1.0kb upstream 1.0kb upstream 22035 true Chr03: 2705683-2727717 Phaseolus vulgaris
Phvul.003G111801 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2705683-2706682 Phaseolus vulgaris
Phvul.003G111801 1.0kb downstream 1.0kb downstream 22035 true Chr03: 2706683-2728717 Phaseolus vulgaris
Phvul.003G111801 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2727718-2728717 Phaseolus vulgaris
Phvul.003G111801 2.0kb upstream 2.0kb upstream 23035 true Chr03: 2704683-2727717 Phaseolus vulgaris
Phvul.003G111801 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2704683-2706682 Phaseolus vulgaris
Phvul.003G111801 2.0kb downstream 2.0kb downstream 23035 true Chr03: 2706683-2729717 Phaseolus vulgaris
Phvul.003G111801 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2727718-2729717 Phaseolus vulgaris
Phvul.003G111801 5.0kb upstream 5.0kb upstream 26035 true Chr03: 2701683-2727717 Phaseolus vulgaris
Phvul.003G111801 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2701683-2706682 Phaseolus vulgaris
Phvul.003G111801 5.0kb downstream 5.0kb downstream 26035 true Chr03: 2706683-2732717 Phaseolus vulgaris
Phvul.003G111801 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2727718-2732717 Phaseolus vulgaris
Phvul.003G111801 10.0kb upstream 10.0kb upstream 31035 true Chr03: 2696683-2727717 Phaseolus vulgaris
Phvul.003G111801 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2696683-2706682 Phaseolus vulgaris
Phvul.003G111801 10.0kb downstream 10.0kb downstream 31035 true Chr03: 2706683-2737717 Phaseolus vulgaris
Phvul.003G111801 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2727718-2737717 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301778 5265 Fabidae View MSA
124066750 5270 Rosid View MSA
123749440 5271 Pentapetalae View MSA
122791523 5272 Eudicot View MSA
122046775 5273 Angiosperm View MSA
123429177 5275 Viridiplantae View MSA
121348768 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.3122 0.0 41.5462    
cufflinks 14.1765 0.0 38.7694    
cufflinks 26.4448 0.0 69.1314   High
cufflinks 10.299 0.0 29.1582    
cufflinks 7.54044 0.0 22.0366    
cufflinks 27.1631 0.0 70.9544   High
cufflinks 3.56529 0.0 11.2815   Low
cufflinks 4.70617 0.0 14.3604    
cufflinks 3.30968 0.0 10.5875   Low
cufflinks 11.0369 0.0 30.8685    
cufflinks 7.2967 0.0 21.3316    

0 Strain