Gene : Phvul.003G113700 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1143
Name:  ? Phvul.003G113700 Secondary Identifier:  ? PAC:37147309
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G113700 0.5kb upstream 0.5kb upstream 2696 true Chr03: 29028098-29030793 Phaseolus vulgaris
Phvul.003G113700 0.5kb upstream 0.5kb upstream 500 false Chr03: 29028098-29028597 Phaseolus vulgaris
Phvul.003G113700 0.5kb downstream 0.5kb downstream 2696 true Chr03: 29028598-29031293 Phaseolus vulgaris
Phvul.003G113700 0.5kb downstream 0.5kb downstream 500 false Chr03: 29030794-29031293 Phaseolus vulgaris
Phvul.003G113700 1.0kb upstream 1.0kb upstream 3196 true Chr03: 29027598-29030793 Phaseolus vulgaris
Phvul.003G113700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 29027598-29028597 Phaseolus vulgaris
Phvul.003G113700 1.0kb downstream 1.0kb downstream 3196 true Chr03: 29028598-29031793 Phaseolus vulgaris
Phvul.003G113700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 29030794-29031793 Phaseolus vulgaris
Phvul.003G113700 2.0kb upstream 2.0kb upstream 4196 true Chr03: 29026598-29030793 Phaseolus vulgaris
Phvul.003G113700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 29026598-29028597 Phaseolus vulgaris
Phvul.003G113700 2.0kb downstream 2.0kb downstream 4196 true Chr03: 29028598-29032793 Phaseolus vulgaris
Phvul.003G113700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 29030794-29032793 Phaseolus vulgaris
Phvul.003G113700 5.0kb upstream 5.0kb upstream 7196 true Chr03: 29023598-29030793 Phaseolus vulgaris
Phvul.003G113700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 29023598-29028597 Phaseolus vulgaris
Phvul.003G113700 5.0kb downstream 5.0kb downstream 7196 true Chr03: 29028598-29035793 Phaseolus vulgaris
Phvul.003G113700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 29030794-29035793 Phaseolus vulgaris
Phvul.003G113700 10.0kb upstream 10.0kb upstream 12196 true Chr03: 29018598-29030793 Phaseolus vulgaris
Phvul.003G113700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 29018598-29028597 Phaseolus vulgaris
Phvul.003G113700 10.0kb downstream 10.0kb downstream 12196 true Chr03: 29028598-29040793 Phaseolus vulgaris
Phvul.003G113700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 29030794-29040793 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305226 5265 Fabidae View MSA
124070263 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0758036 0.0 0.335078 Low  
cufflinks 0.070658 0.0 0.314463 Low  
cufflinks 0.169751 0.0 0.695714 Low  
cufflinks 0.146467 0.0 0.612164 Low  
cufflinks 0.313725 0.0 1.23521 Low High
cufflinks 0.0643145 0.0 0.288642 Low  
cufflinks 0.0828593 0.0 0.362476 Low  
cufflinks 0.0196372 0.0 0.0994278 Low Low
cufflinks 0.273101 0.0 1.08078 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.292519 0.0 1.15686 Low High

0 Strain