Gene : Phvul.003G119100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR16166:SF93 - PROTEIN T08G11.1, ISOFORM A Genomic Order:  1197
Name:  ? Phvul.003G119100 Secondary Identifier:  ? PAC:37145451
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G119100 0.5kb upstream 0.5kb upstream 72519 true Chr03: 30232650-30305168 Phaseolus vulgaris
Phvul.003G119100 0.5kb upstream 0.5kb upstream 500 false Chr03: 30304669-30305168 Phaseolus vulgaris
Phvul.003G119100 0.5kb downstream 0.5kb downstream 72519 true Chr03: 30232150-30304668 Phaseolus vulgaris
Phvul.003G119100 0.5kb downstream 0.5kb downstream 500 false Chr03: 30232150-30232649 Phaseolus vulgaris
Phvul.003G119100 1.0kb upstream 1.0kb upstream 73019 true Chr03: 30232650-30305668 Phaseolus vulgaris
Phvul.003G119100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30304669-30305668 Phaseolus vulgaris
Phvul.003G119100 1.0kb downstream 1.0kb downstream 73019 true Chr03: 30231650-30304668 Phaseolus vulgaris
Phvul.003G119100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30231650-30232649 Phaseolus vulgaris
Phvul.003G119100 2.0kb upstream 2.0kb upstream 74019 true Chr03: 30232650-30306668 Phaseolus vulgaris
Phvul.003G119100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30304669-30306668 Phaseolus vulgaris
Phvul.003G119100 2.0kb downstream 2.0kb downstream 74019 true Chr03: 30230650-30304668 Phaseolus vulgaris
Phvul.003G119100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30230650-30232649 Phaseolus vulgaris
Phvul.003G119100 5.0kb upstream 5.0kb upstream 77019 true Chr03: 30232650-30309668 Phaseolus vulgaris
Phvul.003G119100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30304669-30309668 Phaseolus vulgaris
Phvul.003G119100 5.0kb downstream 5.0kb downstream 77019 true Chr03: 30227650-30304668 Phaseolus vulgaris
Phvul.003G119100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30227650-30232649 Phaseolus vulgaris
Phvul.003G119100 10.0kb upstream 10.0kb upstream 82019 true Chr03: 30232650-30314668 Phaseolus vulgaris
Phvul.003G119100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30304669-30314668 Phaseolus vulgaris
Phvul.003G119100 10.0kb downstream 10.0kb downstream 82019 true Chr03: 30222650-30304668 Phaseolus vulgaris
Phvul.003G119100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30222650-30232649 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312200 5265 Fabidae View MSA
124063980 5270 Rosid View MSA
123740207 5271 Pentapetalae View MSA
122785969 5272 Eudicot View MSA
122048720 5273 Angiosperm View MSA
121349358 5274 Embryophyte View MSA
123424206 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.18665 0.0 6.20959   Low
cufflinks 5.47856 0.0 15.496    
cufflinks 5.42251 0.0 20.7752    
cufflinks 1.97105 0.0 6.92388   Low
cufflinks 8.16659 0.0 28.3114    
cufflinks 6.29412 0.0 24.0873    
cufflinks 10.2828 0.0 37.3146    
cufflinks 13.8725 0.0 63.4314   High
cufflinks 9.00322 0.0 37.9299    
cufflinks 19.9731 0.0 102.537   High
cufflinks 4.38326 0.0 14.656    

0 Strain