Gene : Phvul.003G118700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23227 - BUCENTAUR RELATED Genomic Order:  1193
Name:  ? Phvul.003G118700 Secondary Identifier:  ? PAC:37148103
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G118700 0.5kb upstream 0.5kb upstream 3220 true Chr03: 30193515-30196734 Phaseolus vulgaris
Phvul.003G118700 0.5kb upstream 0.5kb upstream 500 false Chr03: 30193515-30194014 Phaseolus vulgaris
Phvul.003G118700 0.5kb downstream 0.5kb downstream 3220 true Chr03: 30194015-30197234 Phaseolus vulgaris
Phvul.003G118700 0.5kb downstream 0.5kb downstream 500 false Chr03: 30196735-30197234 Phaseolus vulgaris
Phvul.003G118700 1.0kb upstream 1.0kb upstream 3720 true Chr03: 30193015-30196734 Phaseolus vulgaris
Phvul.003G118700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30193015-30194014 Phaseolus vulgaris
Phvul.003G118700 1.0kb downstream 1.0kb downstream 3720 true Chr03: 30194015-30197734 Phaseolus vulgaris
Phvul.003G118700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30196735-30197734 Phaseolus vulgaris
Phvul.003G118700 2.0kb upstream 2.0kb upstream 4720 true Chr03: 30192015-30196734 Phaseolus vulgaris
Phvul.003G118700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30192015-30194014 Phaseolus vulgaris
Phvul.003G118700 2.0kb downstream 2.0kb downstream 4720 true Chr03: 30194015-30198734 Phaseolus vulgaris
Phvul.003G118700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30196735-30198734 Phaseolus vulgaris
Phvul.003G118700 5.0kb upstream 5.0kb upstream 7720 true Chr03: 30189015-30196734 Phaseolus vulgaris
Phvul.003G118700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30189015-30194014 Phaseolus vulgaris
Phvul.003G118700 5.0kb downstream 5.0kb downstream 7720 true Chr03: 30194015-30201734 Phaseolus vulgaris
Phvul.003G118700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30196735-30201734 Phaseolus vulgaris
Phvul.003G118700 10.0kb upstream 10.0kb upstream 12720 true Chr03: 30184015-30196734 Phaseolus vulgaris
Phvul.003G118700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30184015-30194014 Phaseolus vulgaris
Phvul.003G118700 10.0kb downstream 10.0kb downstream 12720 true Chr03: 30194015-30206734 Phaseolus vulgaris
Phvul.003G118700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30196735-30206734 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308099 5265 Fabidae View MSA
124061024 5270 Rosid View MSA
123752119 5271 Pentapetalae View MSA
122786900 5272 Eudicot View MSA
122044103 5273 Angiosperm View MSA
121343963 5274 Embryophyte View MSA
123425140 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.52942 0.0 23.495    
cufflinks 8.15433 0.0 22.538    
cufflinks 9.79454 0.0 26.5963   High
cufflinks 7.33167 0.0 20.6106    
cufflinks 7.27773 0.0 20.5524   Low
cufflinks 8.82795 0.0 24.1946    
cufflinks 6.86935 0.0 19.1999   Low
cufflinks 7.94972 0.0 21.8809    
cufflinks 8.15868 0.0 22.4712    
cufflinks 7.62575 0.0 21.2634    
cufflinks 8.94771 0.0 24.6564    

0 Strain