Gene : Phvul.003G229000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11654:SF121 - PROTEIN NRT1/ PTR FAMILY 7.3 Genomic Order:  2324
Name:  ? Phvul.003G229000 Secondary Identifier:  ? PAC:37146296
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G229000 0.5kb upstream 0.5kb upstream 5772 true Chr03: 46042907-46048678 Phaseolus vulgaris
Phvul.003G229000 0.5kb upstream 0.5kb upstream 500 false Chr03: 46048179-46048678 Phaseolus vulgaris
Phvul.003G229000 0.5kb downstream 0.5kb downstream 5772 true Chr03: 46042407-46048178 Phaseolus vulgaris
Phvul.003G229000 0.5kb downstream 0.5kb downstream 500 false Chr03: 46042407-46042906 Phaseolus vulgaris
Phvul.003G229000 1.0kb upstream 1.0kb upstream 6272 true Chr03: 46042907-46049178 Phaseolus vulgaris
Phvul.003G229000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46048179-46049178 Phaseolus vulgaris
Phvul.003G229000 1.0kb downstream 1.0kb downstream 6272 true Chr03: 46041907-46048178 Phaseolus vulgaris
Phvul.003G229000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46041907-46042906 Phaseolus vulgaris
Phvul.003G229000 2.0kb upstream 2.0kb upstream 7272 true Chr03: 46042907-46050178 Phaseolus vulgaris
Phvul.003G229000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46048179-46050178 Phaseolus vulgaris
Phvul.003G229000 2.0kb downstream 2.0kb downstream 7272 true Chr03: 46040907-46048178 Phaseolus vulgaris
Phvul.003G229000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46040907-46042906 Phaseolus vulgaris
Phvul.003G229000 5.0kb upstream 5.0kb upstream 10272 true Chr03: 46042907-46053178 Phaseolus vulgaris
Phvul.003G229000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46048179-46053178 Phaseolus vulgaris
Phvul.003G229000 5.0kb downstream 5.0kb downstream 10272 true Chr03: 46037907-46048178 Phaseolus vulgaris
Phvul.003G229000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46037907-46042906 Phaseolus vulgaris
Phvul.003G229000 10.0kb upstream 10.0kb upstream 15272 true Chr03: 46042907-46058178 Phaseolus vulgaris
Phvul.003G229000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46048179-46058178 Phaseolus vulgaris
Phvul.003G229000 10.0kb downstream 10.0kb downstream 15272 true Chr03: 46032907-46048178 Phaseolus vulgaris
Phvul.003G229000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46032907-46042906 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311036 5265 Fabidae View MSA
124068315 5270 Rosid View MSA
123746803 5271 Pentapetalae View MSA
122794508 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.3968 0.0 277.569 High High
cufflinks 6.70789 0.0 18.2986    
cufflinks 1.52472 0.0 4.84276    
cufflinks 11.2824 0.0 29.751    
cufflinks 3.14779 0.0 9.30469    
cufflinks 0.688745 0.0 2.39846   Low
cufflinks 7.4394 0.0 20.1263    
cufflinks 5.39719 0.0 14.9661    
cufflinks 61.8488 0.0 168.913 High High
cufflinks 3.98468 0.0 11.4111    
cufflinks 1.58977 0.0 5.07899    

0 Strain