Gene : Phvul.003G170400 P. vulgaris v2.1
Defline:  (1 of 1) KOG1012//KOG1328 - Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain // Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation Genomic Order:  1727
Name:  ? Phvul.003G170400 Secondary Identifier:  ? PAC:37145812
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G170400 0.5kb upstream 0.5kb upstream 10887 true Chr03: 39253162-39264048 Phaseolus vulgaris
Phvul.003G170400 0.5kb upstream 0.5kb upstream 500 false Chr03: 39253162-39253661 Phaseolus vulgaris
Phvul.003G170400 0.5kb downstream 0.5kb downstream 10887 true Chr03: 39253662-39264548 Phaseolus vulgaris
Phvul.003G170400 0.5kb downstream 0.5kb downstream 500 false Chr03: 39264049-39264548 Phaseolus vulgaris
Phvul.003G170400 1.0kb upstream 1.0kb upstream 11387 true Chr03: 39252662-39264048 Phaseolus vulgaris
Phvul.003G170400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39252662-39253661 Phaseolus vulgaris
Phvul.003G170400 1.0kb downstream 1.0kb downstream 11387 true Chr03: 39253662-39265048 Phaseolus vulgaris
Phvul.003G170400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39264049-39265048 Phaseolus vulgaris
Phvul.003G170400 2.0kb upstream 2.0kb upstream 12387 true Chr03: 39251662-39264048 Phaseolus vulgaris
Phvul.003G170400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39251662-39253661 Phaseolus vulgaris
Phvul.003G170400 2.0kb downstream 2.0kb downstream 12387 true Chr03: 39253662-39266048 Phaseolus vulgaris
Phvul.003G170400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39264049-39266048 Phaseolus vulgaris
Phvul.003G170400 5.0kb upstream 5.0kb upstream 15387 true Chr03: 39248662-39264048 Phaseolus vulgaris
Phvul.003G170400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39248662-39253661 Phaseolus vulgaris
Phvul.003G170400 5.0kb downstream 5.0kb downstream 15387 true Chr03: 39253662-39269048 Phaseolus vulgaris
Phvul.003G170400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39264049-39269048 Phaseolus vulgaris
Phvul.003G170400 10.0kb upstream 10.0kb upstream 20387 true Chr03: 39243662-39264048 Phaseolus vulgaris
Phvul.003G170400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39243662-39253661 Phaseolus vulgaris
Phvul.003G170400 10.0kb downstream 10.0kb downstream 20387 true Chr03: 39253662-39274048 Phaseolus vulgaris
Phvul.003G170400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39264049-39274048 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312116 5265 Fabidae View MSA
124064660 5270 Rosid View MSA
123752757 5271 Pentapetalae View MSA
122788574 5272 Eudicot View MSA
122044144 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121350044 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1756 0.0 54.7388   Low
cufflinks 36.1221 0.0 94.5651 High  
cufflinks 37.5475 0.0 98.6306    
cufflinks 31.0132 0.0 80.4808    
cufflinks 34.2269 0.0 89.1379 High  
cufflinks 35.7732 0.0 93.6514 High  
cufflinks 30.7335 0.0 79.9438 High  
cufflinks 33.0985 0.0 86.5148 High  
cufflinks 33.2928 0.0 86.7309 High  
cufflinks 42.1758 0.0 111.336 High High
cufflinks 42.6989 0.0 112.545 High High

0 Strain