Gene : Phvul.003G227400 P. vulgaris v2.1
Defline:  (1 of 2) K01338 - ATP-dependent Lon protease (lon) Genomic Order:  2308
Name:  ? Phvul.003G227400 Secondary Identifier:  ? PAC:37147600
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G227400 0.5kb upstream 0.5kb upstream 16844 true Chr03: 45888381-45905224 Phaseolus vulgaris
Phvul.003G227400 0.5kb upstream 0.5kb upstream 500 false Chr03: 45888381-45888880 Phaseolus vulgaris
Phvul.003G227400 0.5kb downstream 0.5kb downstream 16844 true Chr03: 45888881-45905724 Phaseolus vulgaris
Phvul.003G227400 0.5kb downstream 0.5kb downstream 500 false Chr03: 45905225-45905724 Phaseolus vulgaris
Phvul.003G227400 1.0kb upstream 1.0kb upstream 17344 true Chr03: 45887881-45905224 Phaseolus vulgaris
Phvul.003G227400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45887881-45888880 Phaseolus vulgaris
Phvul.003G227400 1.0kb downstream 1.0kb downstream 17344 true Chr03: 45888881-45906224 Phaseolus vulgaris
Phvul.003G227400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45905225-45906224 Phaseolus vulgaris
Phvul.003G227400 2.0kb upstream 2.0kb upstream 18344 true Chr03: 45886881-45905224 Phaseolus vulgaris
Phvul.003G227400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45886881-45888880 Phaseolus vulgaris
Phvul.003G227400 2.0kb downstream 2.0kb downstream 18344 true Chr03: 45888881-45907224 Phaseolus vulgaris
Phvul.003G227400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45905225-45907224 Phaseolus vulgaris
Phvul.003G227400 5.0kb upstream 5.0kb upstream 21344 true Chr03: 45883881-45905224 Phaseolus vulgaris
Phvul.003G227400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45883881-45888880 Phaseolus vulgaris
Phvul.003G227400 5.0kb downstream 5.0kb downstream 21344 true Chr03: 45888881-45910224 Phaseolus vulgaris
Phvul.003G227400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45905225-45910224 Phaseolus vulgaris
Phvul.003G227400 10.0kb upstream 10.0kb upstream 26344 true Chr03: 45878881-45905224 Phaseolus vulgaris
Phvul.003G227400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45878881-45888880 Phaseolus vulgaris
Phvul.003G227400 10.0kb downstream 10.0kb downstream 26344 true Chr03: 45888881-45915224 Phaseolus vulgaris
Phvul.003G227400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45905225-45915224 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787777 5272 Eudicot View MSA
122310749 5265 Fabidae View MSA
124064687 5270 Rosid View MSA
123747145 5271 Pentapetalae View MSA
122044816 5273 Angiosperm View MSA
121344887 5274 Embryophyte View MSA
123425765 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.6846 0.0 98.0885 High High
cufflinks 18.7628 0.0 49.0678    
cufflinks 13.0994 0.0 33.9006    
cufflinks 18.8394 0.0 49.085    
cufflinks 14.3485 0.0 37.1394    
cufflinks 8.88055 0.0 23.0109   Low
cufflinks 11.8644 0.0 30.6704    
cufflinks 9.68432 0.0 25.0502   Low
cufflinks 12.6132 0.0 32.6147    
cufflinks 31.5271 0.0 85.4453   High
cufflinks 15.3707 0.0 39.8506    

0 Strain