Gene : Phvul.003G170000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR20855//PTHR20855:SF32 - ADIPOR/PROGESTIN RECEPTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1723
Name:  ? Phvul.003G170000 Secondary Identifier:  ? PAC:37145410
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G170000 0.5kb upstream 0.5kb upstream 3393 true Chr03: 39165607-39168999 Phaseolus vulgaris
Phvul.003G170000 0.5kb upstream 0.5kb upstream 500 false Chr03: 39168500-39168999 Phaseolus vulgaris
Phvul.003G170000 0.5kb downstream 0.5kb downstream 3393 true Chr03: 39165107-39168499 Phaseolus vulgaris
Phvul.003G170000 0.5kb downstream 0.5kb downstream 500 false Chr03: 39165107-39165606 Phaseolus vulgaris
Phvul.003G170000 1.0kb upstream 1.0kb upstream 3893 true Chr03: 39165607-39169499 Phaseolus vulgaris
Phvul.003G170000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39168500-39169499 Phaseolus vulgaris
Phvul.003G170000 1.0kb downstream 1.0kb downstream 3893 true Chr03: 39164607-39168499 Phaseolus vulgaris
Phvul.003G170000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39164607-39165606 Phaseolus vulgaris
Phvul.003G170000 2.0kb upstream 2.0kb upstream 4893 true Chr03: 39165607-39170499 Phaseolus vulgaris
Phvul.003G170000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39168500-39170499 Phaseolus vulgaris
Phvul.003G170000 2.0kb downstream 2.0kb downstream 4893 true Chr03: 39163607-39168499 Phaseolus vulgaris
Phvul.003G170000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39163607-39165606 Phaseolus vulgaris
Phvul.003G170000 5.0kb upstream 5.0kb upstream 7893 true Chr03: 39165607-39173499 Phaseolus vulgaris
Phvul.003G170000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39168500-39173499 Phaseolus vulgaris
Phvul.003G170000 5.0kb downstream 5.0kb downstream 7893 true Chr03: 39160607-39168499 Phaseolus vulgaris
Phvul.003G170000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39160607-39165606 Phaseolus vulgaris
Phvul.003G170000 10.0kb upstream 10.0kb upstream 12893 true Chr03: 39165607-39178499 Phaseolus vulgaris
Phvul.003G170000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39168500-39178499 Phaseolus vulgaris
Phvul.003G170000 10.0kb downstream 10.0kb downstream 12893 true Chr03: 39155607-39168499 Phaseolus vulgaris
Phvul.003G170000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39155607-39165606 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307165 5265 Fabidae View MSA
124066042 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.11783 0.0 22.7812    
cufflinks 2.94787 0.0 9.23126   Low
cufflinks 16.7223 0.0 44.1514    
cufflinks 27.5546 0.0 71.3166   High
cufflinks 10.5458 0.0 28.9777    
cufflinks 14.0544 0.0 37.6037    
cufflinks 13.0055 0.0 35.0308    
cufflinks 8.14242 0.0 22.8074    
cufflinks 8.30313 0.0 23.2308    
cufflinks 15.9641 0.0 42.3274    
cufflinks 10.0866 0.0 27.8188    

0 Strain