Gene : Phvul.003G170900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10903:SF68 - TRANSLOCASE OF CHLOROPLAST 90, CHLOROPLASTIC Genomic Order:  1733
Name:  ? Phvul.003G170900 Secondary Identifier:  ? PAC:37147315
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G170900 0.5kb upstream 0.5kb upstream 6369 true Chr03: 39293276-39299644 Phaseolus vulgaris
Phvul.003G170900 0.5kb upstream 0.5kb upstream 500 false Chr03: 39299145-39299644 Phaseolus vulgaris
Phvul.003G170900 0.5kb downstream 0.5kb downstream 6369 true Chr03: 39292776-39299144 Phaseolus vulgaris
Phvul.003G170900 0.5kb downstream 0.5kb downstream 500 false Chr03: 39292776-39293275 Phaseolus vulgaris
Phvul.003G170900 1.0kb upstream 1.0kb upstream 6869 true Chr03: 39293276-39300144 Phaseolus vulgaris
Phvul.003G170900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39299145-39300144 Phaseolus vulgaris
Phvul.003G170900 1.0kb downstream 1.0kb downstream 6869 true Chr03: 39292276-39299144 Phaseolus vulgaris
Phvul.003G170900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39292276-39293275 Phaseolus vulgaris
Phvul.003G170900 2.0kb upstream 2.0kb upstream 7869 true Chr03: 39293276-39301144 Phaseolus vulgaris
Phvul.003G170900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39299145-39301144 Phaseolus vulgaris
Phvul.003G170900 2.0kb downstream 2.0kb downstream 7869 true Chr03: 39291276-39299144 Phaseolus vulgaris
Phvul.003G170900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39291276-39293275 Phaseolus vulgaris
Phvul.003G170900 5.0kb upstream 5.0kb upstream 10869 true Chr03: 39293276-39304144 Phaseolus vulgaris
Phvul.003G170900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39299145-39304144 Phaseolus vulgaris
Phvul.003G170900 5.0kb downstream 5.0kb downstream 10869 true Chr03: 39288276-39299144 Phaseolus vulgaris
Phvul.003G170900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39288276-39293275 Phaseolus vulgaris
Phvul.003G170900 10.0kb upstream 10.0kb upstream 15869 true Chr03: 39293276-39309144 Phaseolus vulgaris
Phvul.003G170900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39299145-39309144 Phaseolus vulgaris
Phvul.003G170900 10.0kb downstream 10.0kb downstream 15869 true Chr03: 39283276-39299144 Phaseolus vulgaris
Phvul.003G170900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39283276-39293275 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314878 5265 Fabidae View MSA
124069161 5270 Rosid View MSA
123748605 5271 Pentapetalae View MSA
122793067 5272 Eudicot View MSA
122047543 5273 Angiosperm View MSA
121310755 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.03884 0.0 8.69295    
cufflinks 4.05131 0.0 11.3244    
cufflinks 9.18743 0.0 24.0496   High
cufflinks 2.60851 0.0 7.67914    
cufflinks 3.05474 0.0 8.84459    
cufflinks 7.58277 0.0 20.1117   High
cufflinks 3.22504 0.0 9.22297    
cufflinks 3.61485 0.0 10.157    
cufflinks 3.57382 0.0 10.1516    
cufflinks 6.21969 0.0 16.7574    
cufflinks 2.4421 0.0 7.24373   Low

0 Strain