Gene : Phvul.003G174600 P. vulgaris v2.1
Genomic Order:  1770 Name:  ? Phvul.003G174600
Secondary Identifier:  ? PAC:37146642
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G174600 0.5kb upstream 0.5kb upstream 1562 true Chr03: 39660387-39661948 Phaseolus vulgaris
Phvul.003G174600 0.5kb upstream 0.5kb upstream 500 false Chr03: 39660387-39660886 Phaseolus vulgaris
Phvul.003G174600 0.5kb downstream 0.5kb downstream 1562 true Chr03: 39660887-39662448 Phaseolus vulgaris
Phvul.003G174600 0.5kb downstream 0.5kb downstream 500 false Chr03: 39661949-39662448 Phaseolus vulgaris
Phvul.003G174600 1.0kb upstream 1.0kb upstream 2062 true Chr03: 39659887-39661948 Phaseolus vulgaris
Phvul.003G174600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39659887-39660886 Phaseolus vulgaris
Phvul.003G174600 1.0kb downstream 1.0kb downstream 2062 true Chr03: 39660887-39662948 Phaseolus vulgaris
Phvul.003G174600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39661949-39662948 Phaseolus vulgaris
Phvul.003G174600 2.0kb upstream 2.0kb upstream 3062 true Chr03: 39658887-39661948 Phaseolus vulgaris
Phvul.003G174600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39658887-39660886 Phaseolus vulgaris
Phvul.003G174600 2.0kb downstream 2.0kb downstream 3062 true Chr03: 39660887-39663948 Phaseolus vulgaris
Phvul.003G174600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39661949-39663948 Phaseolus vulgaris
Phvul.003G174600 5.0kb upstream 5.0kb upstream 6062 true Chr03: 39655887-39661948 Phaseolus vulgaris
Phvul.003G174600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39655887-39660886 Phaseolus vulgaris
Phvul.003G174600 5.0kb downstream 5.0kb downstream 6062 true Chr03: 39660887-39666948 Phaseolus vulgaris
Phvul.003G174600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39661949-39666948 Phaseolus vulgaris
Phvul.003G174600 10.0kb upstream 10.0kb upstream 11062 true Chr03: 39650887-39661948 Phaseolus vulgaris
Phvul.003G174600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39650887-39660886 Phaseolus vulgaris
Phvul.003G174600 10.0kb downstream 10.0kb downstream 11062 true Chr03: 39660887-39671948 Phaseolus vulgaris
Phvul.003G174600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39661949-39671948 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314638 5265 Fabidae View MSA
124065781 5270 Rosid View MSA
123747015 5271 Pentapetalae View MSA
122794452 5272 Eudicot View MSA
122048166 5273 Angiosperm View MSA
121310871 5274 Embryophyte View MSA
123348254 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.1858 0.0 16.0833    
cufflinks 5.52573 0.0 17.0905    
cufflinks 3.09775 0.0 10.2834    
cufflinks 12.213 0.0 34.1813   High
cufflinks 3.96151 0.0 12.7    
cufflinks 3.43575 0.0 11.2281    
cufflinks 3.81426 0.0 12.2109    
cufflinks 9.53849 0.0 27.6811   High
cufflinks 1.66425 0.0 5.85397   Low
cufflinks 3.34732 0.0 10.9324    
cufflinks 6.23842 0.0 18.9292    

0 Strain