Gene : Phvul.003G229300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2327
Name:  ? Phvul.003G229300 Secondary Identifier:  ? PAC:37147054
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G229300 0.5kb upstream 0.5kb upstream 4301 true Chr03: 46096135-46100435 Phaseolus vulgaris
Phvul.003G229300 0.5kb upstream 0.5kb upstream 500 false Chr03: 46096135-46096634 Phaseolus vulgaris
Phvul.003G229300 0.5kb downstream 0.5kb downstream 4301 true Chr03: 46096635-46100935 Phaseolus vulgaris
Phvul.003G229300 0.5kb downstream 0.5kb downstream 500 false Chr03: 46100436-46100935 Phaseolus vulgaris
Phvul.003G229300 1.0kb upstream 1.0kb upstream 4801 true Chr03: 46095635-46100435 Phaseolus vulgaris
Phvul.003G229300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46095635-46096634 Phaseolus vulgaris
Phvul.003G229300 1.0kb downstream 1.0kb downstream 4801 true Chr03: 46096635-46101435 Phaseolus vulgaris
Phvul.003G229300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46100436-46101435 Phaseolus vulgaris
Phvul.003G229300 2.0kb upstream 2.0kb upstream 5801 true Chr03: 46094635-46100435 Phaseolus vulgaris
Phvul.003G229300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46094635-46096634 Phaseolus vulgaris
Phvul.003G229300 2.0kb downstream 2.0kb downstream 5801 true Chr03: 46096635-46102435 Phaseolus vulgaris
Phvul.003G229300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46100436-46102435 Phaseolus vulgaris
Phvul.003G229300 5.0kb upstream 5.0kb upstream 8801 true Chr03: 46091635-46100435 Phaseolus vulgaris
Phvul.003G229300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46091635-46096634 Phaseolus vulgaris
Phvul.003G229300 5.0kb downstream 5.0kb downstream 8801 true Chr03: 46096635-46105435 Phaseolus vulgaris
Phvul.003G229300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46100436-46105435 Phaseolus vulgaris
Phvul.003G229300 10.0kb upstream 10.0kb upstream 13801 true Chr03: 46086635-46100435 Phaseolus vulgaris
Phvul.003G229300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46086635-46096634 Phaseolus vulgaris
Phvul.003G229300 10.0kb downstream 10.0kb downstream 13801 true Chr03: 46096635-46110435 Phaseolus vulgaris
Phvul.003G229300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46100436-46110435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307392 5265 Fabidae View MSA
124068007 5270 Rosid View MSA
123749839 5271 Pentapetalae View MSA
122786941 5272 Eudicot View MSA
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.7461 0.0 101.378   High
cufflinks 20.0202 0.0 68.9702    
cufflinks 10.1247 0.0 33.9594    
cufflinks 19.5763 0.0 68.0268    
cufflinks 13.4063 0.0 51.6774    
cufflinks 8.83788 0.0 30.9269   Low
cufflinks 9.73212 0.0 39.289   Low
cufflinks 11.3456 0.0 43.8947    
cufflinks 14.07 0.0 52.5775    
cufflinks 16.1776 0.0 58.0324    
cufflinks 14.6726 0.0 54.1674    

0 Strain