Gene : Phvul.003G172900 P. vulgaris v2.1
Genomic Order:  1753 Name:  ? Phvul.003G172900
Secondary Identifier:  ? PAC:37145326
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G172900 0.5kb upstream 0.5kb upstream 2857 true Chr03: 39501050-39503906 Phaseolus vulgaris
Phvul.003G172900 0.5kb upstream 0.5kb upstream 500 false Chr03: 39501050-39501549 Phaseolus vulgaris
Phvul.003G172900 0.5kb downstream 0.5kb downstream 2857 true Chr03: 39501550-39504406 Phaseolus vulgaris
Phvul.003G172900 0.5kb downstream 0.5kb downstream 500 false Chr03: 39503907-39504406 Phaseolus vulgaris
Phvul.003G172900 1.0kb upstream 1.0kb upstream 3357 true Chr03: 39500550-39503906 Phaseolus vulgaris
Phvul.003G172900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39500550-39501549 Phaseolus vulgaris
Phvul.003G172900 1.0kb downstream 1.0kb downstream 3357 true Chr03: 39501550-39504906 Phaseolus vulgaris
Phvul.003G172900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39503907-39504906 Phaseolus vulgaris
Phvul.003G172900 2.0kb upstream 2.0kb upstream 4357 true Chr03: 39499550-39503906 Phaseolus vulgaris
Phvul.003G172900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39499550-39501549 Phaseolus vulgaris
Phvul.003G172900 2.0kb downstream 2.0kb downstream 4357 true Chr03: 39501550-39505906 Phaseolus vulgaris
Phvul.003G172900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39503907-39505906 Phaseolus vulgaris
Phvul.003G172900 5.0kb upstream 5.0kb upstream 7357 true Chr03: 39496550-39503906 Phaseolus vulgaris
Phvul.003G172900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39496550-39501549 Phaseolus vulgaris
Phvul.003G172900 5.0kb downstream 5.0kb downstream 7357 true Chr03: 39501550-39508906 Phaseolus vulgaris
Phvul.003G172900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39503907-39508906 Phaseolus vulgaris
Phvul.003G172900 10.0kb upstream 10.0kb upstream 12357 true Chr03: 39491550-39503906 Phaseolus vulgaris
Phvul.003G172900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39491550-39501549 Phaseolus vulgaris
Phvul.003G172900 10.0kb downstream 10.0kb downstream 12357 true Chr03: 39501550-39513906 Phaseolus vulgaris
Phvul.003G172900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39503907-39513906 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027774 5273 Angiosperm View MSA
122311982 5265 Fabidae View MSA
124063450 5270 Rosid View MSA
123745602 5271 Pentapetalae View MSA
122771566 5272 Eudicot View MSA
121297384 5274 Embryophyte View MSA
123335447 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.4171 0.0 5.32826    
cufflinks 1.57021 0.0 6.19316    
cufflinks 20.5017 0.0 57.0256   High
cufflinks 2.53719 0.0 9.14469    
cufflinks 2.04097 0.0 7.79703    
cufflinks 11.3715 0.0 35.7151   High
cufflinks 2.4293 0.0 11.2131    
cufflinks 9.73886 0.0 34.2265    
cufflinks 0.345097 0.0 3.18917 Low Low
cufflinks 2.33135 0.0 7.92985    
cufflinks 5.43447 0.0 19.3041    

0 Strain