Gene : Phvul.003G229400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13832:SF340 - PROTEIN PHOSPHATASE 2C 29 Genomic Order:  2328
Name:  ? Phvul.003G229400 Secondary Identifier:  ? PAC:37145269
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G229400 0.5kb upstream 0.5kb upstream 5672 true Chr03: 46108054-46113725 Phaseolus vulgaris
Phvul.003G229400 0.5kb upstream 0.5kb upstream 500 false Chr03: 46108054-46108553 Phaseolus vulgaris
Phvul.003G229400 0.5kb downstream 0.5kb downstream 5672 true Chr03: 46108554-46114225 Phaseolus vulgaris
Phvul.003G229400 0.5kb downstream 0.5kb downstream 500 false Chr03: 46113726-46114225 Phaseolus vulgaris
Phvul.003G229400 1.0kb upstream 1.0kb upstream 6172 true Chr03: 46107554-46113725 Phaseolus vulgaris
Phvul.003G229400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46107554-46108553 Phaseolus vulgaris
Phvul.003G229400 1.0kb downstream 1.0kb downstream 6172 true Chr03: 46108554-46114725 Phaseolus vulgaris
Phvul.003G229400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46113726-46114725 Phaseolus vulgaris
Phvul.003G229400 2.0kb upstream 2.0kb upstream 7172 true Chr03: 46106554-46113725 Phaseolus vulgaris
Phvul.003G229400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46106554-46108553 Phaseolus vulgaris
Phvul.003G229400 2.0kb downstream 2.0kb downstream 7172 true Chr03: 46108554-46115725 Phaseolus vulgaris
Phvul.003G229400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46113726-46115725 Phaseolus vulgaris
Phvul.003G229400 5.0kb upstream 5.0kb upstream 10172 true Chr03: 46103554-46113725 Phaseolus vulgaris
Phvul.003G229400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46103554-46108553 Phaseolus vulgaris
Phvul.003G229400 5.0kb downstream 5.0kb downstream 10172 true Chr03: 46108554-46118725 Phaseolus vulgaris
Phvul.003G229400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46113726-46118725 Phaseolus vulgaris
Phvul.003G229400 10.0kb upstream 10.0kb upstream 15172 true Chr03: 46098554-46113725 Phaseolus vulgaris
Phvul.003G229400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46098554-46108553 Phaseolus vulgaris
Phvul.003G229400 10.0kb downstream 10.0kb downstream 15172 true Chr03: 46108554-46123725 Phaseolus vulgaris
Phvul.003G229400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46113726-46123725 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122310977 5265 Fabidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.85398 0.0 25.5021    
cufflinks 9.34168 0.0 24.2094    
cufflinks 10.0664 0.0 26.0694    
cufflinks 5.5892 0.0 14.8766   Low
cufflinks 13.3638 0.0 34.5678    
cufflinks 10.3065 0.0 26.6673    
cufflinks 13.0946 0.0 33.8868    
cufflinks 9.85971 0.0 25.52    
cufflinks 17.6296 0.0 45.9392   High
cufflinks 13.6418 0.0 35.3002    
cufflinks 10.7506 0.0 27.7919    

0 Strain