Gene : Phvul.003G230200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  2336
Name:  ? Phvul.003G230200 Secondary Identifier:  ? PAC:37145788
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Ontology Annotation Displayer

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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G230200 0.5kb upstream 0.5kb upstream 5939 true Chr03: 46189556-46195494 Phaseolus vulgaris
Phvul.003G230200 0.5kb upstream 0.5kb upstream 500 false Chr03: 46194995-46195494 Phaseolus vulgaris
Phvul.003G230200 0.5kb downstream 0.5kb downstream 5939 true Chr03: 46189056-46194994 Phaseolus vulgaris
Phvul.003G230200 0.5kb downstream 0.5kb downstream 500 false Chr03: 46189056-46189555 Phaseolus vulgaris
Phvul.003G230200 1.0kb upstream 1.0kb upstream 6439 true Chr03: 46189556-46195994 Phaseolus vulgaris
Phvul.003G230200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46194995-46195994 Phaseolus vulgaris
Phvul.003G230200 1.0kb downstream 1.0kb downstream 6439 true Chr03: 46188556-46194994 Phaseolus vulgaris
Phvul.003G230200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46188556-46189555 Phaseolus vulgaris
Phvul.003G230200 2.0kb upstream 2.0kb upstream 7439 true Chr03: 46189556-46196994 Phaseolus vulgaris
Phvul.003G230200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46194995-46196994 Phaseolus vulgaris
Phvul.003G230200 2.0kb downstream 2.0kb downstream 7439 true Chr03: 46187556-46194994 Phaseolus vulgaris
Phvul.003G230200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46187556-46189555 Phaseolus vulgaris
Phvul.003G230200 5.0kb upstream 5.0kb upstream 10439 true Chr03: 46189556-46199994 Phaseolus vulgaris
Phvul.003G230200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46194995-46199994 Phaseolus vulgaris
Phvul.003G230200 5.0kb downstream 5.0kb downstream 10439 true Chr03: 46184556-46194994 Phaseolus vulgaris
Phvul.003G230200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46184556-46189555 Phaseolus vulgaris
Phvul.003G230200 10.0kb upstream 10.0kb upstream 15439 true Chr03: 46189556-46204994 Phaseolus vulgaris
Phvul.003G230200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46194995-46204994 Phaseolus vulgaris
Phvul.003G230200 10.0kb downstream 10.0kb downstream 15439 true Chr03: 46179556-46194994 Phaseolus vulgaris
Phvul.003G230200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46179556-46189555 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306518 5265 Fabidae View MSA
124062702 5270 Rosid View MSA
123739911 5271 Pentapetalae View MSA
122791268 5272 Eudicot View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7275 0.0 55.5373    
cufflinks 34.2241 0.0 89.0863 High  
cufflinks 114.589 0.0 305.572 High High
cufflinks 23.5515 0.0 62.6082    
cufflinks 19.0379 0.0 51.4194    
cufflinks 70.2506 0.0 182.449 High High
cufflinks 5.90809 0.0 17.9151   Low
cufflinks 9.24848 0.0 26.6836    
cufflinks 3.45249 0.0 11.1368   Low
cufflinks 17.5238 0.0 47.6564    
cufflinks 18.0094 0.0 48.8514    

0 Strain