Gene : Phvul.003G233000 P. vulgaris v2.1
Genomic Order:  2365 Name:  ? Phvul.003G233000
Secondary Identifier:  ? PAC:37146183
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G233000 0.5kb upstream 0.5kb upstream 1229 true Chr03: 46657578-46658806 Phaseolus vulgaris
Phvul.003G233000 0.5kb upstream 0.5kb upstream 500 false Chr03: 46657578-46658077 Phaseolus vulgaris
Phvul.003G233000 0.5kb downstream 0.5kb downstream 1229 true Chr03: 46658078-46659306 Phaseolus vulgaris
Phvul.003G233000 0.5kb downstream 0.5kb downstream 500 false Chr03: 46658807-46659306 Phaseolus vulgaris
Phvul.003G233000 1.0kb upstream 1.0kb upstream 1729 true Chr03: 46657078-46658806 Phaseolus vulgaris
Phvul.003G233000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46657078-46658077 Phaseolus vulgaris
Phvul.003G233000 1.0kb downstream 1.0kb downstream 1729 true Chr03: 46658078-46659806 Phaseolus vulgaris
Phvul.003G233000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46658807-46659806 Phaseolus vulgaris
Phvul.003G233000 2.0kb upstream 2.0kb upstream 2729 true Chr03: 46656078-46658806 Phaseolus vulgaris
Phvul.003G233000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46656078-46658077 Phaseolus vulgaris
Phvul.003G233000 2.0kb downstream 2.0kb downstream 2729 true Chr03: 46658078-46660806 Phaseolus vulgaris
Phvul.003G233000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46658807-46660806 Phaseolus vulgaris
Phvul.003G233000 5.0kb upstream 5.0kb upstream 5729 true Chr03: 46653078-46658806 Phaseolus vulgaris
Phvul.003G233000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46653078-46658077 Phaseolus vulgaris
Phvul.003G233000 5.0kb downstream 5.0kb downstream 5729 true Chr03: 46658078-46663806 Phaseolus vulgaris
Phvul.003G233000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46658807-46663806 Phaseolus vulgaris
Phvul.003G233000 10.0kb upstream 10.0kb upstream 10729 true Chr03: 46648078-46658806 Phaseolus vulgaris
Phvul.003G233000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46648078-46658077 Phaseolus vulgaris
Phvul.003G233000 10.0kb downstream 10.0kb downstream 10729 true Chr03: 46658078-46668806 Phaseolus vulgaris
Phvul.003G233000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46658807-46668806 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302498 5265 Fabidae View MSA
124070215 5270 Rosid View MSA
123748040 5271 Pentapetalae View MSA
122795474 5272 Eudicot View MSA
122049581 5273 Angiosperm View MSA
121311486 5274 Embryophyte View MSA
123348778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55563 0.0 5.70089    
cufflinks 0.684921 0.0 2.68641   Low
cufflinks 6.36185 0.0 20.0008    
cufflinks 0.767143 0.0 2.99618   Low
cufflinks 5.53812 0.0 17.8931    
cufflinks 4.51583 0.0 14.784    
cufflinks 11.1768 0.0 33.0117   High
cufflinks 10.3109 0.0 30.6298    
cufflinks 10.2223 0.0 30.5566    
cufflinks 0.663473 0.0 2.61468   Low
cufflinks 7.5453 0.0 23.5077    

0 Strain