Gene : Phvul.003G232500 P. vulgaris v2.1
Genomic Order:  2360 Name:  ? Phvul.003G232500
Secondary Identifier:  ? PAC:37146690
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G232500 0.5kb upstream 0.5kb upstream 6563 true Chr03: 46595445-46602007 Phaseolus vulgaris
Phvul.003G232500 0.5kb upstream 0.5kb upstream 500 false Chr03: 46601508-46602007 Phaseolus vulgaris
Phvul.003G232500 0.5kb downstream 0.5kb downstream 6563 true Chr03: 46594945-46601507 Phaseolus vulgaris
Phvul.003G232500 0.5kb downstream 0.5kb downstream 500 false Chr03: 46594945-46595444 Phaseolus vulgaris
Phvul.003G232500 1.0kb upstream 1.0kb upstream 7063 true Chr03: 46595445-46602507 Phaseolus vulgaris
Phvul.003G232500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 46601508-46602507 Phaseolus vulgaris
Phvul.003G232500 1.0kb downstream 1.0kb downstream 7063 true Chr03: 46594445-46601507 Phaseolus vulgaris
Phvul.003G232500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 46594445-46595444 Phaseolus vulgaris
Phvul.003G232500 2.0kb upstream 2.0kb upstream 8063 true Chr03: 46595445-46603507 Phaseolus vulgaris
Phvul.003G232500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 46601508-46603507 Phaseolus vulgaris
Phvul.003G232500 2.0kb downstream 2.0kb downstream 8063 true Chr03: 46593445-46601507 Phaseolus vulgaris
Phvul.003G232500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 46593445-46595444 Phaseolus vulgaris
Phvul.003G232500 5.0kb upstream 5.0kb upstream 11063 true Chr03: 46595445-46606507 Phaseolus vulgaris
Phvul.003G232500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 46601508-46606507 Phaseolus vulgaris
Phvul.003G232500 5.0kb downstream 5.0kb downstream 11063 true Chr03: 46590445-46601507 Phaseolus vulgaris
Phvul.003G232500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 46590445-46595444 Phaseolus vulgaris
Phvul.003G232500 10.0kb upstream 10.0kb upstream 16063 true Chr03: 46595445-46611507 Phaseolus vulgaris
Phvul.003G232500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 46601508-46611507 Phaseolus vulgaris
Phvul.003G232500 10.0kb downstream 10.0kb downstream 16063 true Chr03: 46585445-46601507 Phaseolus vulgaris
Phvul.003G232500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 46585445-46595444 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314102 5265 Fabidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.44174 0.0 24.8477   Low
cufflinks 9.07558 0.0 42.4741    
cufflinks 11.8791 0.0 51.0258    
cufflinks 15.162 0.0 56.1724   High
cufflinks 9.76441 0.0 44.3658    
cufflinks 7.05918 0.0 33.5084   Low
cufflinks 8.79285 0.0 40.474    
cufflinks 9.04951 0.0 41.1768    
cufflinks 12.6978 0.0 55.1735    
cufflinks 8.1461 0.0 38.8254    
cufflinks 13.5977 0.0 64.3281   High

0 Strain