Gene : Phvul.003G176500 P. vulgaris v2.1
Defline:  (1 of 7) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  1790
Name:  ? Phvul.003G176500 Secondary Identifier:  ? PAC:37144522
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G176500 0.5kb upstream 0.5kb upstream 3790 true Chr03: 39963090-39966879 Phaseolus vulgaris
Phvul.003G176500 0.5kb upstream 0.5kb upstream 500 false Chr03: 39966380-39966879 Phaseolus vulgaris
Phvul.003G176500 0.5kb downstream 0.5kb downstream 3790 true Chr03: 39962590-39966379 Phaseolus vulgaris
Phvul.003G176500 0.5kb downstream 0.5kb downstream 500 false Chr03: 39962590-39963089 Phaseolus vulgaris
Phvul.003G176500 1.0kb upstream 1.0kb upstream 4290 true Chr03: 39963090-39967379 Phaseolus vulgaris
Phvul.003G176500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39966380-39967379 Phaseolus vulgaris
Phvul.003G176500 1.0kb downstream 1.0kb downstream 4290 true Chr03: 39962090-39966379 Phaseolus vulgaris
Phvul.003G176500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39962090-39963089 Phaseolus vulgaris
Phvul.003G176500 2.0kb upstream 2.0kb upstream 5290 true Chr03: 39963090-39968379 Phaseolus vulgaris
Phvul.003G176500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39966380-39968379 Phaseolus vulgaris
Phvul.003G176500 2.0kb downstream 2.0kb downstream 5290 true Chr03: 39961090-39966379 Phaseolus vulgaris
Phvul.003G176500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39961090-39963089 Phaseolus vulgaris
Phvul.003G176500 5.0kb upstream 5.0kb upstream 8290 true Chr03: 39963090-39971379 Phaseolus vulgaris
Phvul.003G176500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39966380-39971379 Phaseolus vulgaris
Phvul.003G176500 5.0kb downstream 5.0kb downstream 8290 true Chr03: 39958090-39966379 Phaseolus vulgaris
Phvul.003G176500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39958090-39963089 Phaseolus vulgaris
Phvul.003G176500 10.0kb upstream 10.0kb upstream 13290 true Chr03: 39963090-39976379 Phaseolus vulgaris
Phvul.003G176500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39966380-39976379 Phaseolus vulgaris
Phvul.003G176500 10.0kb downstream 10.0kb downstream 13290 true Chr03: 39953090-39966379 Phaseolus vulgaris
Phvul.003G176500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39953090-39963089 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301332 5265 Fabidae View MSA
124065665 5270 Rosid View MSA
123740189 5271 Pentapetalae View MSA
122787334 5272 Eudicot View MSA
122050076 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9521 0.0 5.94308    
cufflinks 14.6261 0.0 37.8741    
cufflinks 3.62979 0.0 10.3617    
cufflinks 1.77078 0.0 5.43124    
cufflinks 9.29046 0.0 24.3703    
cufflinks 13.4659 0.0 34.9328    
cufflinks 8.21313 0.0 21.7086    
cufflinks 5.02683 0.0 13.894    
cufflinks 10.7932 0.0 28.1469    
cufflinks 0.0927361 0.0 0.378696 Low Low
cufflinks 9.19202 0.0 24.1614    

0 Strain